CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTAAGCACTAACGCCAATATCAACTTCTGCAATGTACAGATTAAA
AACTTGAAGCTTTGTAGTCTTCTAGTGTTTCTGTGTTTCTTATACTGAAT
TAACTGGCCTCATGTAACTTCTAGGTATCCATAAGGAGCTAGTATGCTGT
TGAATGGTATGAGGAATGGGTGTGGCAGCAGTCCCAAGATGGTGCCCAAG
ACTGCAGCCAAGTCTTATGACTTGCACCTGACTTCCTCATACACCTGAAA
ATAAGCCACATCCATCGTGAGAACTGCGCAGGTGCACCATGATGCAAGAT
CGGACCATATGATGAGTGATGATTCTGGCCAATGGACTGCTGTTACGTGG
ACTGGGCTGATGGGGCATGGTTGAGAGGATATATAAGGGATTGCGATTGG
GGGCGGGTTGTTGTTGTTGTTTTCCTGNANAGNNTGATTTCTGNATAGAG
ATTCATGCATGATGATGAAAGGTTTCTGAATAAACTACTTTGAGAAAAAA
TTAATGTTGTTGCTCTTTTCTGTTGCCCTTTGATACGACCTTGAACACTG
TATTTGTATCCGTACCTTATTTTTCTCTCTCTCTTTTACCATCCTTCCCA
TCTCTCTCCGTTCTTTGTACTTTCCCCTTTATTCACCTTTTTTTTTCTCC
CCACTGTTTCTCCCTCC

CTTTTTATTCTTCTTCTTTTTTTATATCTGGTTATGCTTAATATTTTATA
TCGATGTAGTGTGTAGCCTGGNGGATGTGTGGTTGCAAAAAGGAGGNNGA
NGGATAGAGTGTTCCCAGAAAAGAGGGTGGGNGNAGTGTGATGAGGTTTT
GAGGGGTGAGGTGTAGGTTTTACCCGAATAGAAGGGGGTTGTTGAATATA
GAGTGTTTGTGTTAGGGGTGTGGAGTAGATTGGTAGTTTTGGAGGTGAGG
TTTTTTTTTGTATAGGTTGTTGAGTGGTGAATTTGGTAGTGGGGAGTGAT
TGTGTGATTTTGTGGGTTATTGTTTTGTGGGGTGATTTATGGGGGGTATA
TAGAAGATTATTATTTAATAAATGGATGTGTGAGTATGTATTTTATTTTT
TTTAAAGGCGTTTGAGGAGTGGGGGGAGGGGGAGGAGGAAGTTTTTGTTG
TGGGTGTTTGTGTTGTGTTGAGTGTGTGGGGGGTAGGGGAGGTGGGAGAT
GAGGGTAATGTTGGTGATTTGTTAAGTGTTTTGAATTGTGTATGGGGGTT
GGTGGAGGTATTTTTTTTTTTTTTTTTTGTGTACCTTTTTTTTTTGTGGG
GGTTTTTTGGGGTTTAGTGGGGGTTGTTTAGTATTTAGGGGTTGGTGGTT
GTTAAGAGGTTTTTGGTAATTGTGAGTATTTTTTTATGGTGTGTTTTATA
TTTAGGGTGTTTTAAGGGGGGGTTTATGGGTGGTAAGGTGGGAAATTGAG
GGTTAGGGGTTTATAGGGTTTTTTTTTAGAGGGTGTTGTTTTGGGTTTTG
TATGGTGGGGATATGTGTTTTTGTAGTGGGGTTAGGGGGTGGTTGTGGGA
GGAGGAGGGAGTTTGGTTTGTATTATTTGTGAGGGG

Query= MSMg01no189_b03.b1 MSMg01no189_b03.b1 CHROMAT_FILE:
MSMg01no189_b03.b1 PHD_FILE: MSMg01no189_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:56 2005
         (471 letters)



>mm_chr4_68936554_68937425
          Length = 872

 Score =  820 bits (424), Expect = 0.0
 Identities = 455/467 (97%), Gaps = 1/467 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttaagcactaacgccaatatcaactt-ctgcaatgtacagattaaaaacttga 63
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattccttaagcactaacgccaatatcaactttctgcaatgtacagattaaaaacttga 264

                                                                       
Query: 64  agctttgtagtcttctagtgtttctgtgtttcttatactgaattaactggcctcatgtaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctttgtagtcttctagtgtttctgtgtttcttatactgaattaactggcctcatgtaa 324

                                                                       
Query: 124 cttctaggtatccataaggagctagtatgctgttgaatggtatgaggaatgggtgtggca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttctaggtatccataaggagctagtatgctgttgaatggtatgaggaatgggtgtggca 384

                                                                       
Query: 184 gcagtcccaagatggtgcccaagactgcagccaagtcttatgacttgcacctgacttcct 243
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagtcccaagatggtgcccaggactgcagccaagtcttatgacttgcacctgacttcct 444

                                                                       
Query: 244 catacacctgaaaataagccacatccatcgtgagaactgcgcaggtgcaccatgatgcaa 303
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 catacacctgaaaataagccacatccatcgtgagaactgtgcaggtgcaccatgatgcaa 504

                                                                       
Query: 304 gatcggaccatatgatgagtgatgattctggccaatggactgctgttacgtggactgggc 363
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gattggaccatatgatgagtgatgattctggccaatggactgctgttacgtggactgggc 564

                                                                       
Query: 364 tgatggggcatggttgagaggatatataagggattgcgattgggggcgggttgttgttgt 423
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 tgatggggcatggttgagaggatatataagggattgcgattgggggtgggttgttgttgt 624

                                                          
Query: 424 tgttttcctgnanagnntgatttctgnatagagattcatgcatgatg 470
           | |||||||| | ||  ||||||||| | ||||||||||||||||||
Sbjct: 625 ttttttcctggagagggtgatttctggagagagattcatgcatgatg 671


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space:   397382
Effective search space used:   397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)