Query= MSMg01no190_i22.b1 MSMg01no190_i22.b1 CHROMAT_FILE:
MSMg01no190_i22.b1 PHD_FILE: MSMg01no190_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:51 2005
(310 letters)
>mm_chr4_35419353_35420062
Length = 710
Score = 584 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Minus
Query: 5 gaattctctttgttatcctaacaactttcctgtaaatctaaaattatttaaaatttagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaattctctttgttatcctaacaactttcctgtaaatctaaaattatttaaaatttagaa 523
Query: 65 gttcattgtaaatgaaacagaatgacaagcaggaatctccaaaacccgctctgctatctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gttcattgtaaatgaaacagaatgacaagcaggaatctccaaaacccgctctgctatctc 463
Query: 125 tctgggttacctgctaactgggtctgaagacttcccttctacaggaagggttacacttga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tctgggttacctgctaactgggtctgaagacttcccttctacaggaagggttacacttga 403
Query: 185 ctcggacttccctgtaatatctccaatagctcctctttggtagctggcgcttaagtcaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctcggacttccctgtaatatctccaatagctcctctttggtagctggcgcttaagtcaag 343
Query: 245 acaatttggtattctgtctcaaaatatttgtctccaggggttactttcacacttgtttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 342 acaatttggtattctgtctcaaaatatttgtctccaggggttactttcacacttgttcca 283
Query: 305 tagaaa 310
||||||
Sbjct: 282 tagaaa 277
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_i22.g1 MSMg01no190_i22.g1 CHROMAT_FILE:
MSMg01no190_i22.g1 PHD_FILE: MSMg01no190_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:51 2005
(277 letters)
>mm_chr4_35320584_35321259
Length = 676
Score = 520 bits (269), Expect = e-152
Identities = 275/277 (99%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 1 tcccgagcagcagaggttttttgtaccaggagattaagtagcataggaaattacagccct 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccgagcagcagaggttttt-gtaccaggagattaagtagcataggaaattacagccct 259
Query: 61 gcatttgtgctgtctgagttaaggtggtgtcagcattcctattttaggccattattttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcatttgtgctgtctgagttaaggtggtgtcagcattcctattttaggccattattttca 319
Query: 121 aggatgtgagcttgcctgggacatacggattcagcctgagagtcacacatgcacaccgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggatgtgagcttgcctgggacatacggattcagcctgagagtcacacatgcacaccgag 379
Query: 181 tgctctaagtgggctcgtgcatcactgtgccaaacacccccggagaagggacgggtcatt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 tgctctaagtgggctcgtgcatcactgtgccaaacacccctggagaagggacgggtcatt 439
Query: 241 ggagttggcttttattactattacaaaaagaaaacac 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggagttggcttttattactattacaaaaagaaaacac 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 676
Length adjustment: 9
Effective length of query: 268
Effective length of database: 667
Effective search space: 178756
Effective search space used: 178756
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
