Query= MSMg01no191_a14.b1 MSMg01no191_a14.b1 CHROMAT_FILE:
MSMg01no191_a14.b1 PHD_FILE: MSMg01no191_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:29 2005
(315 letters)
>mm_chr4_129594802_129595515
Length = 714
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattccagtatagccaggactatgcagagaaaatggatctcaaaattaaaaaaaaaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattccagtatagccaggactatgcagagaaaatggatctcaaaattaaaaaaaaaaat 455
Query: 65 ccacctggagtagagagtatttgcatttcataaattctaaacatcactaaaaaaaaaaaa 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccacct-gagtagagagtatttgcatttcataaattctaaacatcactaaaaaaaaaaaa 396
Query: 125 atctgagttgctaagtgatattcaccccaaggccatgagtagacaattccagaaaggaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atctgagttgctaagtgatattcaccccaaggccatgagtagacaattccagaaaggaga 336
Query: 185 cagaaacagtaactaagaacagaagaatcgtctggcttcaacagaagagatacaaactag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cagaaacagtaactaagaacagaagaatcgtctggcttcaacagaagagatacaaactag 276
Query: 245 atacaaatgaaaggattgttccgtcagagtgcagaattcagcccagagtcttttataaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atacaaatgaaaggattgttccgtcagagtgcagaattcagcccagagtcttttataaca 216
Query: 305 caggaaagagc 315
|||||||||||
Sbjct: 215 caggaaagagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_a14.g1 MSMg01no191_a14.g1 CHROMAT_FILE:
MSMg01no191_a14.g1 PHD_FILE: MSMg01no191_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:30 2005
(284 letters)
>mm_chr4_129559500_129560183
Length = 684
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 tgtgagctgctcggtacactgtggtagtgtgaaattggccccggtgggaatatttacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgagctgctcggtacactgtggtagtgtgaaattggccccggtgggaatatttacatc 260
Query: 61 acggaagtgggcaaatgctgcaaaacagagtagtttaatttttatttttaaaagaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggaagtgggcaaatgctgcaaaacagagtagtttaatttttatttttaaaagaaagaa 320
Query: 121 ccagtttcctaacacaaggattcctcaacgagttagcaaaggatgaccccctaggtgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagtttcctaacacaaggattcctcaacgagttagcaaaggatgaccccctaggtgtct 380
Query: 181 agatgctctcctcccccccttccccccgggctcctggagctccacccccactgtcatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgctctcctcccccccttccccccgggctcctggagctccacccccactgtcatcct 440
Query: 241 gagaaaggcaaagtccctgccaaggctgcataccacatcctgtc 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagaaaggcaaagtccctgccaaggctgcataccacatcctgtc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
