Query= MSMg01no193_d09.b1 MSMg01no193_d09.b1 CHROMAT_FILE:
MSMg01no193_d09.b1 PHD_FILE: MSMg01no193_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:30 2005
(319 letters)
>mm_chr4_142287496_142288211
Length = 716
Score = 503 bits (260), Expect = e-147
Identities = 300/314 (95%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgtgtatacctctacttgataataacagccaccttttcctggcatttgtaat 64
|||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgtgtagacat-tacttgataataacagccaccttttcctggcatttgtaat 263
Query: 65 tttagggtcaccaacccacttatgtggactcctgggctacattcataactttttatgtgc 124
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttagggtcaccaaagtaattatgtggactcctgggctacattcataactttttatgtgc 323
Query: 125 cctgatgaaaattacacattttcaataaggcttcacagagagcttcagtgtctggtatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgatgaaaattacacattttcaataaggcttcacagagagcttcagtgtctggtatca 383
Query: 185 agtcacgccagaataagtgggacttgtttggtttaaaaaaaaaaaagtcctttgaaacgt 244
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 agtcacggcagaataagtgggacttgtttggtttaaaaaaaaaa--gtcctttgaaacgt 441
Query: 245 ggagcccttgagaggttagggaataataatcatgatatatttaagactgacatttctaag 304
||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 442 ggagcccttgagaggttagggaataataagcatgagatatttgagactgacatttctaag 501
Query: 305 cactttcctaatga 318
|||||||||||||
Sbjct: 502 tactttcctaatga 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 716
Length adjustment: 9
Effective length of query: 310
Effective length of database: 707
Effective search space: 219170
Effective search space used: 219170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_d09.g1 MSMg01no193_d09.g1 CHROMAT_FILE:
MSMg01no193_d09.g1 PHD_FILE: MSMg01no193_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:31 2005
(110 letters)
>mm_chr4_142429100_142429608
Length = 509
Score = 197 bits (102), Expect = 1e-55
Identities = 108/110 (98%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 1 tttccacggcgttggtcttttaatgagacagggctcatgcacccgtttccatattaaatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tttccacggtgttggtcttttaatgagacagggctcatgcacccgtttccatattaaatt 250
Query: 61 cttataaaaagatcactttttcccttttacaatgtctgccttgatgatgt 110
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 249 cttataaaaagatcactttt-cccttttacaatgtctgccttgatgatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 509
Length adjustment: 8
Effective length of query: 102
Effective length of database: 501
Effective search space: 51102
Effective search space used: 51102
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
