MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-193M18
Chromosome	4 (Build37)
Map Location	115,753,659 - 115,754,197
singlet/doublet	singlet
Overlap gene	Lrrc41
Upstream gene	Pdzk1ip1, Cyp4x1, Cyp4a21-ps, LOC384042, LOC230639, Cyp4a12, LOC546842, Cyp4a12b, LOC435802, LOC666393, LOC230641, Cyp4a14, Cyp4a10, LOC666168, LOC631037, LOC100040843, Cyp4b1, LOC546843, 4732418C07Rik, 4930544O15Rik, Atpaf1, Mobkl2c, Mknk1, Kncn, 6430628N08Rik, Dmbx1, Faah, Nsun4, Uqcrh
Downstream gene	Rad54l, 1520402A15Rik, Pomgnt1, Tspan1, 1700042G07Rik, LOC433748, Pik3r3, Mast2, LOC631400, Ipp, Tmem69, Gpbp1l1, LOC622665, Nasp, Akr1a4, Prdx1, Mmachc, 0610037D15Rik, Tesk2, Toe1, Mutyh, Hpdl, LOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pdzk1ip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67182 MGI:1914432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp4x1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81906 MGI:1932403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp4a21-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547220 MGI:1932405
definition	gene_synonym : Cyp4a21; CYP_b; OTTMUSG00000008613 note : cytochrome P450, family 4, subfamily a, polypeptide 21, pseudogene pseudo : _no_value

name	LOC384042 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC230639 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins

name	Cyp4a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277753 MGI:88612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Cyp4a12b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13118 MGI:3611747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins

name	LOC666393 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC230641 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Cyp4a14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13119 MGI:1096550
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp4a10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13117 MGI:88611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666168 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 18 Proteins

name	LOC631037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	LOC100040843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 24 Proteins

name	Cyp4b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13120 MGI:103225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	4732418C07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230648 MGI:2442397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930544O15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75173 MGI:1922423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Atpaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230649 MGI:2180560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mobkl2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100465 MGI:2140623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mknk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17346 MGI:894316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kncn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654462 MGI:3614952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430628N08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76237 MGI:1923487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Dmbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140477 MGI:2153518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Faah (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14073 MGI:109609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nsun4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72181 MGI:1919431
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uqcrh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66576 MGI:1913826
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230654 MGI:2441984
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rad54l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19366 MGI:894697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1520402A15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68075 MGI:1915325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 3 Proteins

name	Pomgnt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68273 MGI:1915523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tspan1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66805 MGI:1914055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700042G07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67323 MGI:1914573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs

name	LOC433748 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 103 ESTs, 3 Proteins

name	Pik3r3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18710 MGI:109277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mast2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17776 MGI:894676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC631400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 74 ESTs, 21 Proteins pseudo : _no_value

name	Ipp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16351 MGI:96581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem69 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230657 MGI:3045357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpbp1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77110 MGI:1924360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nasp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50927 MGI:1355328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Akr1a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58810 MGI:1929955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prdx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18477 MGI:99523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmachc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67096 MGI:1914346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	0610037D15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68394 MGI:1915644
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230661 MGI:2385204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Toe1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68276 MGI:1915526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mutyh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70603 MGI:1917853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hpdl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242642 MGI:2444646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625336 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 ESTs, 9 Proteins

name	LOC100041048 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Zswim5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74464 MGI:1921714
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Urod (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22275 MGI:98916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hectd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76608 MGI:1923858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif2b3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108067 MGI:1313286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzk1ip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802816 GeneID:67182 MGI:1914432
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZK1 interacting protein 1 transcript_id : NM_026018.2

name	Cyp4x1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51592064 GeneID:81906 MGI:1932403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily x, polypeptide 1 transcript_id : NM_001003947.1

name	LOC230639 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82894546 GeneID:230639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins product : similar to fatty acid omega-hydroxylase; CYP4A11 transcript_id : XM_144013.5

name	Cyp4a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198311 GeneID:277753 MGI:88612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily a, polypeptide 12 transcript_id : NM_177406.3

name	LOC546842 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82894548 GeneID:546842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : similar to cytochrome P450 transcript_id : XM_621635.2

name	Cyp4a12b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198313 GeneID:13118 MGI:3611747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily a, polypeptide 12B transcript_id : NM_172306.2

name	LOC435802 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82894550 GeneID:435802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins product : similar to cytochrome P450 transcript_id : XM_487818.2

name	Cyp4a14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681120 GeneID:13119 MGI:1096550
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily a, polypeptide 14 transcript_id : NM_007822.1

name	Cyp4a10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059034 GeneID:13117 MGI:88611
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily a, polypeptide 10 transcript_id : NM_010011.2

name	LOC666168 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252865 GeneID:666168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 18 Proteins product : similar to cytochrome P450, family 4, subfamily a, polypeptide 10 transcript_id : XM_001475399.1

name	LOC631037 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372204 GeneID:631037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to CYP4B1 transcript_id : XM_982144.1

name	LOC100040843 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252863 GeneID:100040843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 24 Proteins product : similar to cytochrome P450, family 4, subfamily a, polypeptide 10 transcript_id : XM_001476115.1

name	Cyp4b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131158 GeneID:13120 MGI:103225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 4, subfamily b, polypeptide 1 transcript_id : NM_007823.2

name	4732418C07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254241 GeneID:230648 MGI:2442397
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4732418C07 gene transcript_id : NM_172698.2

name	4930544O15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372208 GeneID:75173 MGI:1922423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930544O15 gene transcript_id : XM_485433.4

name	Atpaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341104 GeneID:230649 MGI:2180560
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase mitochondrial F1 complex assembly factor 1 transcript_id : NM_181040.2

name	Mobkl2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370410 GeneID:100465 MGI:2140623
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MOB1, Mps One Binder kinase activator-like 2C (yeast) transcript_id : NM_175308.3

name	Mknk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371246 GeneID:17346 MGI:894316
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP kinase-interacting serine/threonine kinase 1 transcript_id : NM_021461.3

name	Kncn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366723 GeneID:654462 MGI:3614952
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinocilin transcript_id : NM_001039124.2

name	6430628N08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372209 GeneID:76237 MGI:1923487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 6430628N08 gene transcript_id : XM_149458.3

name	Dmbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909342 GeneID:140477 MGI:2153518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diencephalon/mesencephalon homeobox 1 transcript_id : NM_130865.3

name	Dmbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909348 GeneID:140477 MGI:2153518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diencephalon/mesencephalon homeobox 1 transcript_id : NM_001025567.1

name	Faah (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348835 GeneID:14073 MGI:109609
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid amide hydrolase transcript_id : NM_010173.3

name	Nsun4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802973 GeneID:72181 MGI:1919431
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NOL1/NOP2/Sun domain family, member 4 transcript_id : NM_028142.2

name	Uqcrh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114051412 GeneID:66576 MGI:1913826
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquinol-cytochrome c reductase hinge protein transcript_id : NM_025641.3

name	Lrrc41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859776 GeneID:230654 MGI:2441984
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 41 transcript_id : NM_153521.1

name	Rad54l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982067 GeneID:19366 MGI:894697
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD54 like (S. cerevisiae) transcript_id : NM_009015.2

name	1520402A15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372210 GeneID:68075 MGI:1915325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 3 Proteins product : RIKEN cDNA 1520402A15 gene transcript_id : XM_204182.3

name	Pomgnt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27777637 GeneID:68273 MGI:1915523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase transcript_id : NM_029786.1

name	Pomgnt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22267451 GeneID:68273 MGI:1915523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase transcript_id : NM_026651.1

name	Tspan1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384879 GeneID:66805 MGI:1914055
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetraspanin 1 transcript_id : NM_133681.3

name	1700042G07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252867 GeneID:67323 MGI:1914573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs product : RIKEN cDNA 1700042G07 gene transcript_id : XM_001475594.1

name	LOC433748 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252869 GeneID:433748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 103 ESTs, 3 Proteins product : similar to 1190005P17Rik protein transcript_id : XM_905120.3

name	Pik3r3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130676 GeneID:18710 MGI:109277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) transcript_id : NM_181585.5

name	Mast2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112363077 GeneID:17776 MGI:894676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated serine/threonine kinase 2 transcript_id : NM_008641.2

name	Mast2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112363073 GeneID:17776 MGI:894676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated serine/threonine kinase 2 transcript_id : NM_001042743.1

name	Ipp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368919 GeneID:16351 MGI:96581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IAP promoted placental gene transcript_id : NM_008389.3

name	Tmem69 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361305 GeneID:230657 MGI:3045357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 69 transcript_id : NM_177670.3

name	Gpbp1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734458 GeneID:77110 MGI:1924360
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GC-rich promoter binding protein 1-like 1 transcript_id : NM_029868.2

name	LOC622665 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:142375415 GeneID:622665
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC622665 transcript_id : NM_001037916.2

name	Nasp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490377 GeneID:50927 MGI:1355328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear autoantigenic sperm protein (histone-binding) transcript_id : NM_016777.3

name	Nasp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090504 GeneID:50927 MGI:1355328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear autoantigenic sperm protein (histone-binding) transcript_id : NM_001081475.1

name	Akr1a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981167 GeneID:58810 MGI:1929955
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member A4 (aldehyde reductase) transcript_id : NM_021473.2

name	Prdx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802543 GeneID:18477 MGI:99523
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxiredoxin 1 transcript_id : NM_011034.3

name	Mmachc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344135 GeneID:67096 MGI:1914346
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylmalonic aciduria cblC type, with homocystinuria transcript_id : NM_025962.2

name	0610037D15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053899 GeneID:68394 MGI:1915644
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610037D15 gene transcript_id : NM_026714.2

name	Tesk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361402 GeneID:230661 MGI:2385204
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis-specific kinase 2 transcript_id : NM_146151.3

name	Toe1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129870 GeneID:68276 MGI:1915526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : target of EGR1, member 1 (nuclear) transcript_id : NM_026654.2

name	Mutyh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875427 GeneID:70603 MGI:1917853
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutY homolog (E. coli) transcript_id : NM_133250.1

name	Hpdl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348524 GeneID:242642 MGI:2444646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 4-hydroxyphenylpyruvate dioxygenase-like transcript_id : NM_146256.3

name	LOC625336 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252874 GeneID:625336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 52 ESTs, 9 Proteins product : similar to Rpl36 protein transcript_id : XM_889902.3

name	Zswim5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131187 GeneID:74464 MGI:1921714
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, SWIM domain containing 5 transcript_id : NM_001029912.2

name	Urod (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347605 GeneID:22275 MGI:98916
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uroporphyrinogen decarboxylase transcript_id : NM_009478.2

name	Hectd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271517 GeneID:76608 MGI:1923858
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT domain containing 3 transcript_id : NM_175244.3

name	Eif2b3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384892 GeneID:108067 MGI:1313286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2B, subunit 3 transcript_id : NM_175135.3

name	Pdzk1ip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385522 CCDS:CCDS18487.1 GeneID:67182 MGI:1914432
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : membrane-associated protein 17 (Map17) product : membrane-associated protein 17 protein_id : NP_080294.1

name	Cyp4x1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51592065 CCDS:CCDS18488.1 GeneID:81906 MGI:1932403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 function : monooxygenase note : cytochrome P450, 4x1 product : cytochrome P450, family 4, subfamily x, polypeptide 1 protein_id : NP_001003947.1

name	LOC230639 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894547 GeneID:230639
definition	codon_start : 1 product : similar to fatty acid omega-hydroxylase; CYP4A11 protein_id : XP_144013.5

name	Cyp4a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198312 CCDS:CCDS18489.1 GeneID:277753 MGI:88612
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : novel protein similar to cytochrome P450, family 4, subfamily a, polypeptide 12 (Cyp4a12) product : cytochrome P450, family 4, subfamily a, polypeptide 12 protein_id : NP_803125.2

name	LOC546842 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894549 GeneID:546842
definition	codon_start : 1 product : similar to cytochrome P450 protein_id : XP_621635.2

name	Cyp4a12b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198314 CCDS:CCDS18490.1 GeneID:13118 MGI:3611747
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : cytochrome P450, family 4, subfamily a, polypeptide 12 product : cytochrome P450, family 4, subfamily a family protein_id : NP_758510.2

name	LOC435802 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894551 GeneID:435802
definition	codon_start : 1 product : similar to cytochrome P450 protein_id : XP_487818.2

name	Cyp4a14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681121 CCDS:CCDS18491.1 GeneID:13119 MGI:1096550
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0018685 - alkane 1-monooxygenase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : cytochrome P450, 4a14 product : cytochrome P450, family 4, subfamily a, polypeptide 14 protein_id : NP_031848.1

name	Cyp4a10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059035 CCDS:CCDS18492.1 GeneID:13117 MGI:88611
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] [Evidence IDA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence TAS] [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 4a10 product : cytochrome P450, family 4, subfamily a, polypeptide 10 protein_id : NP_034141.2

name	LOC666168 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252866 GeneID:666168
definition	codon_start : 1 product : similar to cytochrome P450, family 4, subfamily a, polypeptide 10 protein_id : XP_001475449.1

name	LOC631037 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372205 GeneID:631037
definition	codon_start : 1 product : similar to CYP4B1 protein_id : XP_987238.1

name	LOC100040843 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252864 GeneID:100040843
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476165.1

name	Cyp4b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681123 CCDS:CCDS18493.1 GeneID:13120 MGI:103225
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, subfamily IV B, polypeptide 1 product : cytochrome P450, family 4, subfamily b, polypeptide 1 protein_id : NP_031849.1

name	4732418C07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254242 CCDS:CCDS18494.1 GeneID:230648 MGI:2442397
definition	codon_start : 1 product : hypothetical protein LOC230648 protein_id : NP_766286.2

name	4930544O15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51709407 GeneID:75173 MGI:1922423
definition	codon_start : 1 product : hypothetical protein LOC75173 protein_id : XP_485433.1

name	Atpaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794370 CCDS:CCDS18496.1 GeneID:230649 MGI:2180560
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006461 - protein complex assembly [Evidence IEA] codon_start : 1 product : ATP synthase mitochondrial F1 complex assembly factor 1 protein_id : NP_851383.1

name	Mobkl2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424984 CCDS:CCDS18497.1 GeneID:100465 MGI:2140623
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : MOB1, Mps One Binder kinase activator-like 2C protein_id : NP_780517.1

name	Mknk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946850 CCDS:CCDS18498.1 GeneID:17346 MGI:894316
definition	GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IDA] [Evidence IEA]; GO:0006950 - response to stress [Evidence NAS] codon_start : 1 product : MAP kinase-interacting serine/threonine kinase 1 protein_id : NP_067436.1

name	Kncn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84993776 CCDS:CCDS18499.1 GeneID:654462 MGI:3614952
definition	codon_start : 1 product : kinocilin protein_id : NP_001034213.1

name	6430628N08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20841478 GeneID:76237 MGI:1923487
definition	codon_start : 1 product : hypothetical protein LOC76237 protein_id : XP_149458.1

name	Dmbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909343 GeneID:140477 MGI:2153518
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEP] [Evidence ISS] GO_process : GO:0007417 - central nervous system development [Evidence IEP] [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence IEP] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; orthodenticle 3; homeobox gene Atx; orthodenticle homolog 3; diencephalon/mesencephalon-expressed brain homeobox 1 product : orthodenticle homolog 3 isoform a protein_id : NP_570935.3

name	Dmbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909349 CCDS:CCDS18500.1 GeneID:140477 MGI:2153518
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence ISS] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEP] [Evidence ISS] GO_process : GO:0007417 - central nervous system development [Evidence IEP] [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence IEP] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; orthodenticle 3; homeobox gene Atx; orthodenticle homolog 3; diencephalon/mesencephalon-expressed brain homeobox 1 product : orthodenticle homolog 3 isoform b protein_id : NP_001020738.1

name	Faah (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542795 CCDS:CCDS18501.1 GeneID:14073 MGI:109609
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004040 - amidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : amide hydrolase; fatty acid amide hydrolase protein product : fatty acid amide hydrolase protein_id : NP_034303.2

name	Nsun4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312358 CCDS:CCDS18502.1 GeneID:72181 MGI:1919431
definition	codon_start : 1 note : likely ortholog of H. sapiens NOL1/NOP2/Sun domain family, member 4 (NSUN4) product : NOL1/NOP2/Sun domain family, member 4 protein_id : NP_082418.1

name	Uqcrh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539599 GeneID:66576 MGI:1913826
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005746 - mitochondrial electron transport chain [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ubiquinol cytochrome c reductase hinge protein; mitochondrial hinge protein; cytochrome C1, nonheme 11 kDa protein; complex III subunit VIII product : ubiquinol-cytochrome c reductase hinge protein protein_id : NP_079917.1

name	Lrrc41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77377293 GeneID:230654 MGI:2441984
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : Muf1 protein protein_id : NP_705741.2

name	Rad54l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982068 CCDS:CCDS18504.1 GeneID:19366 MGI:894697
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAD54 like protein_id : NP_033041.2

name	1520402A15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94372211 GeneID:68075 MGI:1915325
definition	codon_start : 1 product : hypothetical protein LOC68075 protein_id : XP_204182.3

name	Pomgnt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267452 CCDS:CCDS18506.1 GeneID:68273 MGI:1915523
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence ISS] GO_function : GO:0003827 - alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0047223 - beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity [Evidence ISS]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006487 - protein amino acid N-linked glycosylation [Evidence IEA]; GO:0006493 - protein amino acid O-linked glycosylation [Evidence ISS] [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; O-mannosyl N-acetylglucosaminyltransferase product : O-mannosyl N-acetylglucosaminyltransferase isoform 1 protein_id : NP_080927.1

name	Pomgnt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777638 CCDS:CCDS18507.1 GeneID:68273 MGI:1915523
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence ISS] GO_function : GO:0003827 - alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity [Evidence IEA]; GO:0047223 - beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity [Evidence ISS]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006487 - protein amino acid N-linked glycosylation [Evidence IEA]; GO:0006493 - protein amino acid O-linked glycosylation [Evidence ISS] [Evidence IMP] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; O-mannosyl N-acetylglucosaminyltransferase product : O-mannosyl N-acetylglucosaminyltransferase isoform 2 protein_id : NP_084062.1

name	Tspan1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526840 CCDS:CCDS18508.1 GeneID:66805 MGI:1914055
definition	codon_start : 1 product : tetraspan 1 protein_id : NP_598442.1

name	1700042G07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252868 GeneID:67323 MGI:1914573
definition	codon_start : 1 product : hypothetical protein LOC67323 protein_id : XP_001475644.1

name	LOC433748 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894656 GeneID:433748
definition	codon_start : 1 product : similar to 1190005P17Rik protein protein_id : XP_910213.1

name	Pik3r3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712016 CCDS:CCDS18509.1 GeneID:18710 MGI:109277
definition	GO_component : GO:0005942 - phosphoinositide 3-kinase complex [Evidence IPI] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0046935 - phosphatidylinositol 3-kinase regulator activity [Evidence IDA]; GO:0035014 - phosphoinositide 3-kinase regulator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) protein_id : NP_853616.1

name	Mast2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112363078 GeneID:17776 MGI:894676
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0015630 - microtubule cytoskeleton [Evidence IDA] [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS] [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IDA] [Evidence IEA]; GO:0045075 - regulation of interleukin-12 biosynthesis [Evidence IDA]; GO:0048515 - spermatid differentiation [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; microtubule associated testis specific serine/threonine protein kinase product : microtubule associated serine/threonine kinase 2 isoform 2 protein_id : NP_032667.2

name	Mast2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112363074 GeneID:17776 MGI:894676
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0015630 - microtubule cytoskeleton [Evidence IDA] [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS] [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IDA] [Evidence IEA]; GO:0045075 - regulation of interleukin-12 biosynthesis [Evidence IDA]; GO:0048515 - spermatid differentiation [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; microtubule associated testis specific serine/threonine protein kinase product : microtubule associated serine/threonine kinase 2 isoform 1 protein_id : NP_001036208.1

name	Ipp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111607439 GeneID:16351 MGI:96581
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : IAP promoted placental protein_id : NP_032415.2

name	Tmem69 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244094 GeneID:230657 MGI:3045357
definition	codon_start : 1 product : transmembrane protein 69 protein_id : NP_808338.1

name	Gpbp1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734459 CCDS:CCDS18511.1 GeneID:77110 MGI:1924360
definition	codon_start : 1 product : GC-rich promoter binding protein 1-like 1 protein_id : NP_084144.2

name	LOC622665 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:85702302 CCDS:CCDS18512.1 GeneID:622665
definition	codon_start : 1 product : hypothetical protein LOC622665 protein_id : NP_001033005.1

name	Nasp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090505 GeneID:50927 MGI:1355328
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042393 - histone binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; somatic histone binding protein NASP product : nuclear autoantigenic sperm protein isoform 1 protein_id : NP_001074944.1

name	Nasp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490378 CCDS:CCDS18513.1 GeneID:50927 MGI:1355328
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042393 - histone binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; somatic histone binding protein NASP product : nuclear autoantigenic sperm protein isoform 2 protein_id : NP_058057.3

name	Akr1a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946870 CCDS:CCDS18514.1 GeneID:58810 MGI:1929955
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0008106 - alcohol dehydrogenase (NADP+) activity [Evidence NAS]; GO:0004032 - aldehyde reductase activity [Evidence ISS] [Evidence TAS] [Evidence IDA]; GO:0047939 - L-glucuronate reductase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0046185 - aldehyde catabolism [Evidence IDA]; GO:0008150 - biological_process [Evidence ND]; GO:0042840 - D-glucuronate catabolism [Evidence IDA]; GO:0019853 - L-ascorbic acid biosynthesis [Evidence IDA] codon_start : 1 note : aldehyde reductase; aldo-keto reductase family 1, member A1 (aldehyde reductase) product : aldo-keto reductase family 1, member A4 (aldehyde reductase) protein_id : NP_067448.1

name	Prdx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754976 CCDS:CCDS18515.1 GeneID:18477 MGI:99523
definition	GO_function : GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0051920 - peroxiredoxin activity [Evidence IEA] GO_process : GO:0042345 - regulation of NF-kappaB import into nucleus [Evidence IMP]; GO:0006979 - response to oxidative stress [Evidence IMP] [Evidence IDA] codon_start : 1 note : proliferation-associated gene A; osteoblast specific factor 3; macrophage 23 Kd stress protein; macrophase stress protein 23 kd; Trx dependent peroxide reductase 2; thioredoxin dependent peroxide reductase 2; macrophage 23kDa stress protein; macrophase stress protein 22kDa; Prx I product : peroxiredoxin 1 protein_id : NP_035164.1

name	Mmachc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385456 GeneID:67096 MGI:1914346
definition	GO_function : GO:0031419 - cobalamin binding [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA] codon_start : 1 product : methylmalonic aciduria cblC type, with homocystinuria protein_id : NP_080238.1

name	0610037D15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053900 GeneID:68394 MGI:1915644
definition	codon_start : 1 product : hypothetical protein LOC68394 protein_id : NP_080990.2

name	Tesk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981902 CCDS:CCDS18516.1 GeneID:230661 MGI:2385204
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0006915 - apoptosis [Evidence ISS]; GO:0048041 - focal adhesion formation [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : testis-specific kinase 2 protein_id : NP_666263.2

name	Toe1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311839 CCDS:CCDS18517.1 GeneID:68276 MGI:1915526
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IEA] codon_start : 1 product : TOE1 homolog protein_id : NP_080930.1

name	Mutyh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875428 CCDS:CCDS18518.1 GeneID:70603 MGI:1917853
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence TAS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence TAS]; GO:0008152 - metabolism [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenine-DNA glycosylase; mutY homolog alpha; the full-length form type A, 5' region product : mutY homolog protein_id : NP_573513.1

name	Hpdl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122847 CCDS:CCDS18519.1 GeneID:242642 MGI:2444646
definition	GO_function : GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0009072 - aromatic amino acid family metabolism [Evidence IEA] codon_start : 1 product : glyoxalase domain containing 1 protein_id : NP_666368.1

name	LOC625336 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894566 GeneID:625336
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894995.1

name	Zswim5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71361674 CCDS:CCDS18520.1 GeneID:74464 MGI:1921714
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : zinc finger, SWIM domain containing 5 (Zswim5) product : zinc finger, SWIM domain containing 5 protein_id : NP_001025083.1

name	Urod (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347606 CCDS:CCDS18521.1 GeneID:22275 MGI:98916
definition	GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IDA] [Evidence IMP] GO_process : GO:0042168 - heme metabolism [Evidence IMP]; GO:0006779 - porphyrin biosynthesis [Evidence IEA] codon_start : 1 product : uroporphyrinogen decarboxylase protein_id : NP_033504.2

name	Hectd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424882 CCDS:CCDS18522.1 GeneID:76608 MGI:1923858
definition	GO_component : GO:0005680 - anaphase-promoting complex [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0030071 - regulation of mitotic metaphase/anaphase transition [Evidence IEA] codon_start : 1 product : HECT domain containing 3 protein_id : NP_780453.1

name	Eif2b3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626005 CCDS:CCDS18524.1 GeneID:108067 MGI:1313286
definition	GO_component : GO:0005851 - eukaryotic translation initiation factor 2B complex [Evidence ISS] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 2B, subunit 3 protein_id : NP_780344.2

name	LOC384042 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384042
definition	number : 1 pseudo : _no_value

name	LOC666393 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666393
definition	number : 1 pseudo : _no_value

name	LOC230641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230641
definition	number : 1 pseudo : _no_value

name	LOC230641 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230641
definition	number : 2 pseudo : _no_value

name	LOC546843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546843
definition	number : 1 pseudo : _no_value

name	LOC546843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546843
definition	number : 2 pseudo : _no_value

name	LOC100041048 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041048
definition	number : 2 pseudo : _no_value

name	LOC100041048 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041048
definition	number : 1 pseudo : _no_value

name	LOC631400 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252871 GeneID:631400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 74 ESTs, 21 Proteins product : similar to H3 histone, family 3B pseudo : _no_value transcript_id : XR_032826.1

clone name	MSMg01-355L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524O24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-476E13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517M11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-467F24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-318E11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-190B03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-175D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-539C02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-361H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206C21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132A02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-359B17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-160E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-269L14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-083O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199K19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198N12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-092F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-193M18.T7 (MSMg01no193_m18.b1)	MSMg01-193M18.TJ (MSMg01no193_m18.g1)
ACC	AG382957	AG382958
length	752	729
length of high quality (start - end)	263 (45 - 307)	538 (77 - 614)
definition	CHROMAT_FILE: MSMg01no193_m18.b1 PHD_FILE: MSMg01no193_m18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:12:26 2005	CHROMAT_FILE: MSMg01no193_m18.g1 PHD_FILE: MSMg01no193_m18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:12:26 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCAGACGGTTGTGAGCTGCCGTGTGGGTGCTGGAAATTGAACCTGAC TCCCTGTAAGAACAGCCAGCGCTCTTAACTTCTTAGCCGTCTCTCCAGCC ATGTTTTTCTTTTCTTGTGTCTTGTTTGCTTGCAAAGGAGTTTCACCAGG TTACCCAGGCTGGCCCTTAAACTCCTGGGTTCAAATAATCCATCCAGCTC CTGAGTCCAGAGTAGCTGTAAGTAGAGTGAGCACCACTGCTCACCTGATG TGTCGCCGTCTACAAATCTTGCTCTGGCATGCTGTAGTCAGCGCATGCTT ACATGTTTTTTTTACCCCCCCCCCCCCCTTCANTANAGGTTGTCACACAG TTCTGTTGGCCCCACACCTCTTACAAAGTAGCTTTTCGCTGCCCTTTCCT GTTCTTACTCGACCCCCCAGGGAGATTTTGCCTATTCCCCCCCCCATCCC TTTTCCACCTTTCTTTCCCTTTTTCTCCTTCTTTTACCTTTACTCTCTCT TTCCCCTCACCCCTCTCCTTCACCTATTTCTCCTTTTATTTTTTACATTT TTATCATCTTTCAATCTTCCTCCTATCCCTACTCCGTTCCTCTCCTTTAT CCTTCTACTCTTCTCCTCCTCATTTCTCCTTCACCTTCTTTTTTTTATCC CTCTCATCCCTACCTTCCTATTTTCTTTCTCCTCACATATCCTTCTCTTC TT	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGGCAGGGCTACACAGAG AAACCCTGTCTCGAAAAACCAGAACAAAAAATTCAGTTTGCAAGGCCTTG GTACATTCATCTAGCTTAAGAGAAGCTAAATAAAAAGGATTAAGTGGGGT AGGTCTGGAGAGACATATGGTTCAGCGGTCAACAGCGCTGGCTGCTTTTA CAGATAACCTAGGTGCAGTTCCCAGCACCTTCATGGCACCTCACAACTGT CTGAGACAAACTCCACTTCCAAGAAATCCAATGCCCCTTTCTGGCCTCAC TGAGCACCATGCCTACATGGTACATAGGTATACATGTAGGCAAAACAACC ATACACATAAAATTAAAACACCAAGGACTAAGGACTAGTCATTGTGGTTG AAGCTGCTCACTGTATACTGATCTGTGTGAACATAGGTGAGAGTATATAG GACAAGGGAGAGGGGTAGTCCTGCCTGGTTTTGCAGTAGTCAGCCTATGT GTCCCTATAATAAGGAGAAGAAACATTGATCAGAACTTCAAGATTATCCT TAGCTACATACTGGTTCACGGCCAGCCTTCACTGCATAAAACTGAGACCC CGACTTCAAAAAGACTCCTGTGATGTACAAAACATTCAATGTCTCAATAA TATGTGGAAAAGTATATTTTTACCCCGCG
quality values	Open. Hide. 8 10 8 8 8 9 13 18 33 34 23 22 19 15 15 29 23 21 10 10 10 22 22 43 27 20 24 24 24 35 44 37 31 24 20 20 31 41 44 42 33 22 20 22 42 34 57 57 47 47 47 47 53 47 41 41 41 47 57 59 44 41 28 28 30 32 44 48 59 68 68 68 59 59 48 48 42 59 44 68 68 68 68 68 68 68 68 68 68 68 68 53 57 57 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 41 33 27 24 18 18 17 21 11 11 11 16 23 32 37 41 59 59 50 50 53 53 57 57 48 57 57 57 57 57 57 57 57 53 53 53 53 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 59 59 48 48 48 44 59 40 57 44 57 44 57 43 43 44 47 46 47 47 48 57 57 57 68 68 68 57 44 42 35 35 44 44 57 57 57 57 50 48 47 59 44 43 43 35 35 43 43 43 35 35 59 59 44 59 42 41 33 43 44 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 48 48 57 59 59 57 44 36 25 23 23 44 44 44 44 44 54 54 54 57 59 68 68 59 27 27 9 9 9 27 27 59 59 48 46 46 43 46 46 59 57 57 59 43 43 43 36 36 37 43 33 30 30 32 32 39 31 23 16 11 11 10 11 11 23 27 12 12 10 10 9 10 10 13 11 11 12 20 20 15 15 20 32 32 32 28 19 21 19 11 11 12 11 12 12 15 19 19 23 23 13 12 12 9 9 9 17 11 12 12 15 17 19 21 13 19 16 13 13 11 15 12 12 12 19 18 11 11 11 9 11 16 20 18 18 3 0 3 3 0 3 13 10 10 10 9 9 9 12 9 12 11 11 11 11 20 20 12 12 12 9 9 9 14 10 7 6 6 6 6 6 10 9 10 8 8 7 7 6 8 8 6 6 6 8 9 10 10 15 10 8 8 8 8 6 6 8 8 10 17 23 21 24 15 10 10 12 15 15 13 7 7 8 6 7 9 14 19 30 19 15 8 8 7 7 7 8 9 9 15 15 15 8 8 8 8 10 8 7 9 10 10 17 14 22 22 17 14 9 9 9 10 12 12 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 12 15 16 11 15 8 12 8 8 8 8 8 6 6 10 8 8 8 8 8 10 10 12 8 10 10 13 8 8 10 21 21 18 20 12 9 9 13 10 8 8 8 8 8 10 8 6 6 8 8 9 13 15 11 10 8 8 6 6 10 10 9 10 10 10 11 11 11 17 8 9 9 10 8 8 8 8 8 8 8 8 12 10 7 6 6 6 8 8 8 8 9 8 8 8 8 8 8 8 8 10 12 12 12 10 10 8 8 8 8 10 8 9 10 10 15 15 9 9 9 10 8 8 8 8 8 12 10 10 10 9 11 16 24 21 9 7 7 6 8 8 9 9 13 15 10 6 6 6 6 8 15 10 9 9 9 21 13 13 8 8 8 8 11 11 10 9 9 12 8 6 6 7 7 18 20 12 11 9 8 8 11 10 14 17 13 10 9 9 9 8 8 8 8 8 8 9 10 9 11 8 8 8 8 8 8 8 11 13 10 8 12 15 7 7 6 6 8 8 12 10 10 10 13 9 10 11 10 9 9 10 9 9 9 9	Open. Hide. 8 8 14 19 15 8 8 8 8 17 23 39 39 39 47 47 47 50 50 50 50 53 53 57 53 53 53 57 57 53 48 44 39 29 29 30 28 35 42 42 42 42 42 42 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 42 41 41 41 41 41 42 42 48 48 50 50 50 50 50 50 50 50 50 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 51 51 68 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 59 57 50 50 39 39 33 25 12 8 8 8 12 24 38 48 46 46 48 48 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 53 53 53 53 53 53 59 59 59 50 50 36 36 33 33 59 59 59 59 21 19 8 6 6 8 21 21 41 42 50 50 50 50 53 53 53 53 53 53 57 57 59 59 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 52 50 54 54 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 59 59 57 57 47 40 37 28 28 25 37 36 46 59 43 42 43 43 43 43 43 43 46 47 43 59 59 59 59 68 68 68 59 59 59 57 57 57 57 57 57 59 59 57 57 57 57 57 57 59 59 50 50 50 50 41 36 34 17 17 11 9 9 9 10 12 18 28 34 47 41 48 59 59 59 59 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 57 57 59 57 57 57 57 57 59 59 54 54 54 59 59 59 59 57 57 57 57 57 57 57 57 54 54 57 57 59 59 59 59 59 59 57 57 57 57 57 54 54 57 57 48 42 47 41 42 42 48 40 42 36 28 23 23 23 36 36 43 43 43 43 43 46 39 39 47 42 43 39 39 39 47 43 48 48 43 43 43 59 59 48 30 30 18 18 16 29 29 39 39 37 39 39 39 37 37 33 36 37 37 37 34 34 24 20 20 27 28 30 31 33 33 37 41 48 36 30 28 28 24 28 16 32 20 29 14 9 9 9 9 17 19 25 25 24 24 24 21 27 24 27 17 26 26 17 18 22 30 28 22 22 12 12 12 19 13 18 15 23 12 26 14 19 19 17 13 11 12 12 16 19 15 10 9 9 8 16 12 12 12 12 10 12 10 12 10 13 10 10 6 6 6 6 8 6 9 11 15 15 19 24 14 14 10 10 8 8 8 8 10 10 11 19 13 12 13 16 23 13 13 11 9 8 8 8 8 8 8 8 6 6 6 8 9 6 6 8 6 8 7 6 6 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no193_m18.g1 MSMg01no193_m18.g1 CHROMAT_FILE:
MSMg01no193_m18.g1 PHD_FILE: MSMg01no193_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:26 2005
         (538 letters)



>mm_chr4_115753459_115754398
          Length = 940

 Score =  969 bits (501), Expect = 0.0
 Identities = 529/539 (98%), Gaps = 2/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggacaggcagggctacacagagaaaccctgtctcgaaaaaccagaacaaaaaattcag 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 caggacaggcagggctacacagagaaaccctgtctcgaaaaaccagaaaaaaaaattcag 260

                                                                       
Query: 61  tttgcaaggccttggtacattcatctagcttaagagaagctaaataaaaaggattaagtg 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tttgcaaggccttggtacattcatctagcttaagagaagccaaataaaaaggattaagtg 320

                                                                       
Query: 121 gggtaggtctggagagacatatggttcagcggtcaacagcgctggctgcttttacagata 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gggaaggtctggagagacatatggttcagcggtcaacagcgctggctgcttttactgata 380

                                                                       
Query: 181 acctaggtgcagttcccagcaccttcatggcacctcacaactgtctgagacaaactccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctaggtgcagttcccagcaccttcatggcacctcacaactgtctgagacaaactccac 440

                                                                       
Query: 241 ttccaagaaatccaatgcccctttctggcctcactgagcaccatgcctacatggtacata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccaagaaatccaatgcccctttctggcctcactgagcaccatgcctacatggtacata 500

                                                                       
Query: 301 ggtatacatgtaggcaaaacaaccatacacataaaattaaaacaccaaggactaaggact 360
           |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||
Sbjct: 501 ggtatacatgtaggcaaaacaaccatacacataaaattaaaataaaaaggactaaggact 560

                                                                       
Query: 361 agtcattgtggttgaagctgctcactgtatactgatctgtgtgaacataggtgagagtat 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcatcgtggttgaagctgctcactgtatactgatctgtgtgaacataggtgagagtat 620

                                                                       
Query: 421 ata--ggacaagggagaggggtagtcctgcctggttttgcagtagtcagcctatgtgtcc 478
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atataggacaagggagaggggtagtcctgcctggttttgcagtagtcagcctatgtgtcc 680

                                                                      
Query: 479 ctataataaggagaagaaacattgatcagaacttcaagattatccttagctacatactg 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctataataaggagaagaaacattgatcagaacttcaagattatccttagctacatactg 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 940
Length adjustment: 10
Effective length of query: 528
Effective length of database: 930
Effective search space:   491040
Effective search space used:   491040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information