Query= MSMg01no196_g11.b1 MSMg01no196_g11.b1 CHROMAT_FILE:
MSMg01no196_g11.b1 PHD_FILE: MSMg01no196_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:56 2005
(500 letters)
>mm_chr4_115614922_115615821
Length = 900
Score = 911 bits (471), Expect = 0.0
Identities = 489/495 (98%)
Strand = Plus / Plus
Query: 4 ggaattcatagccactatgccccaagatctccatgccaagatccaggtcagaaacttcta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 204 ggaattcatagccactatgccccaagatctccatgccaagatccaggtcagaaacttgta 263
Query: 64 tctctcagtctccagattaagatcactggtgaaccttccaattctgggctgtagttcatt 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctcccagtctccagattaagatcactggtgaaccttccaattctgggctgtagttcatt 323
Query: 124 ccagatatagtcaagttgacaaccaggaacaggaatagccactacagtggctaagtagcc 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccagatagagtcaagttgacaaccaggaacaggaatagccactacagtggctaagtagcc 383
Query: 184 agtatcattctcattaaacaagctaagcctcatgcaactcaaaattccagacacctggag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtatcattctcattaaacaagctaagcctcatgcaactcaaaattccagacacctggag 443
Query: 244 aagcccacagtgccaggctagacttaccttcaaagggctttcatacaaggggagaccaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagcccacagtgccaggctagacttaccttcaaagggctttcatacaaggggagaccaag 503
Query: 304 gacagagggagctgttgtcactccgtcacattcccaccctccaccctggtttccacagac 363
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 504 gacagagggagctgctgtcactccatcacattcccaccctccaccctggtttccacagac 563
Query: 364 attgtagcccaggtcctggctcctgagtttattgtggattgggaagaggagatacaaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attgtagcccaggtcctggctcctgagtttattgtggattgggaagaggagatacaaaat 623
Query: 424 tccagatgagctcaactgctcagatagaaactcagggaaagagagtaaggctggggaagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccagatgagctcaactgctcagatagaaactcagggaaagagagtaaggctggggaagg 683
Query: 484 gggctgtgcctttta 498
|||||| ||||||||
Sbjct: 684 gggctgcgcctttta 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no196_g11.g1 MSMg01no196_g11.g1 CHROMAT_FILE:
MSMg01no196_g11.g1 PHD_FILE: MSMg01no196_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:56 2005
(224 letters)
>mm_chr4_115707056_115707679
Length = 624
Score = 377 bits (195), Expect = e-109
Identities = 216/223 (96%), Gaps = 2/223 (0%)
Strand = Plus / Minus
Query: 1 atttgatagccattattaggatttagttcataactagaatcaggcttccaagggtctttc 60
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 422 atttgatagccattattaggatttagctcataactagaatcaggcttcaaagggtctttc 363
Query: 61 ttttagctagtgataattatgtgtatgcatacgtgtcttcatattggcatgtgcacacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttttagctagtgataattatgtgtatgcatacgtgtcttcatattggcatgtgcacacta 303
Query: 121 ttagatgcccacgaaggttaaagattttggagccccctggacttggagttgtaggaagtt 180
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 302 ttagatgcccacggaggttaaagattttggagccccctgggcttggagttgtaggaagtt 243
Query: 181 ttgacatgggtgctggggat-tgaacttggctcctccacagca 222
|||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 242 ttgacatgggtgct-gggatctgaacttgggtcctccacagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
