TTTCCCCCCCTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCAGGCCTCACATGGTCCTTAATCCATTTTTAAT
CAATTTTTGCACAGGGTGAGACATGGGAACCAAGCTAGCTTCACATTTCT
ATATCTGGATGTCTACTCTTCTTAGCATCGTTTTCTGAAGAGGCTCTTTT
CTCCAGTGTGTGTTCTATAACTTTGTTAAAATTAGGTGGTTGTAGTTCTG
GGGTGTATTTCTGAGTTCTCTGTCTTAGCTAATTAATCCACCTGACTGGT
TTCATTGCCAGTGACCTACTATTTCTGATACAATGGCTCTCTGGCTATTT
GTGGTCTTTATTTCATATAATTTTATAGACCCCCCCCCCCACCTCTATGA
TCAATGTTATTAGACTTTTAAAATAACGATTGTGATAAGTCTGTAGACTG
CTTTGGCAATATAGCCGCTTGCACACTGCCAATCTATGAGCATGGAAGGT
CTTTCGGCTTTGTGGTGACTTCAACTTCTTTGGTGTATTAAAGTTCTTCT
TGTACAGGACTATTCTTCCGATGGCTCATTCTCATACTTTTTATTTTCAT
ACCACACCCGCATTTCGAATGCATTTTTATGCCCTTTTCTTCAGTTGTAT
CTAATCTTATACTTCTTAAGATTTTTTTATACTCTTATTTATATTTACTG
TTACCATCCATAATATTTCCATACTCCCCCTGAATCATCTATTACCCTAT
TACG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTGCGCATGGTTTATTTCCTGCGGAG
TTGTTAGGGAGCTAAATGTACCTTCACCAGTGATTCCAGTGCCCTCGTCT
GAGATTTGTGAGGACAGTGTTTCTCATTTGGGTATTAAGAAATCTGGGGT
TTAAAAAGAAATAGTGACAGTTATGCAAGCCCTCTTAATACTTAAATATT
TAAATATAAAACTTTTCTTTTTTACTAGCTTTTGGAGTGTCTAAGGAAAA
CACTGAGCAAAGTAGCCAATTGCTTCATCGCTGAGGAGTTCTTGACTCAA
ATATAAAATCTGTTCCTTTCCAATTACAAAAGCAAGGAAGAGAATGGACT
GGCAGAAGAGGATAGTACAAAGGAATTGTTCATGTAATTATTTTAAAGTA
AGATGTTCTAATCTTGGCATGCTACTGTAAATAATTGAGATTTTAAAGCA
ATATAAATTATGTTTTTTTTTTAATCCATAAAACTCTAAACTTTCTCACA
TAGATAATGTGAGAAGGAAGAGAGAGCCCTTGTTCTCATAGTGGTAATCA
AGAGTGGTAGAGCCCTGCCTATGCTAAGCTGTGCAGTGGGCATGAAAGCT
TGAGCTCTGCTCTGCCTCGTGTTGTGCGGCTTAATAACTAGGA

Query= MSMg01no196_h16.g1 MSMg01no196_h16.g1 CHROMAT_FILE:
MSMg01no196_h16.g1 PHD_FILE: MSMg01no196_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:02 2005
         (599 letters)



>mm_chr4_94613222_94614220
          Length = 999

 Score = 1149 bits (594), Expect = 0.0
 Identities = 597/598 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgcgcatggtttatttcctgcggagttgttagggagctaaatgtaccttcaccagtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cttgcgcatggtttatttcctgcggagttgttagggagctaaatgtaccttcaccagtga 739

                                                                       
Query: 61  ttccagtgccctcgtctgagatttgtgaggacagtgtttctcatttgggtattaagaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttccagtgccctcgtctgagatttgtgaggacagtgtttctcatttgggtattaagaaat 679

                                                                       
Query: 121 ctggggtttaaaaagaaatagtgacagttatgcaagccctcttaatacttaaatatttaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctggggtttaaaaagaaatagtgacagttatgcaagccctcttaatacttaaatatttaa 619

                                                                       
Query: 181 atataaaacttttcttttttactagcttttggagtgtctaaggaaaacactgagcaaagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atataaaacttttcttttttactagcttttggagtgtctaaggaaaacactgagcaaagt 559

                                                                       
Query: 241 agccaattgcttcatcgctgaggagttcttgactcaaatataaaatctgttcctttccaa 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 558 agccaattgcttcatcgctgaggagttcttgactcaaatagaaaatctgttcctttccaa 499

                                                                       
Query: 301 ttacaaaagcaaggaagagaatggactggcagaagaggatagtacaaaggaattgttcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttacaaaagcaaggaagagaatggactggcagaagaggatagtacaaaggaattgttcat 439

                                                                       
Query: 361 gtaattattttaaagtaagatgttctaatcttggcatgctactgtaaataattgagattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtaattattttaaagtaagatgttctaatcttggcatgctactgtaaataattgagattt 379

                                                                       
Query: 421 taaagcaatataaattatgttttttttttaatccataaaactctaaactttctcacatag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taaagcaatataaattatgttttttttttaatccataaaactctaaactttctcacatag 319

                                                                       
Query: 481 ataatgtgagaaggaagagagagcccttgttctcatagtggtaatcaagagtggtagagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ataatgtgagaaggaagagagagcccttgttctcatagtggtaatcaagagtggtagagc 259

                                                                     
Query: 541 cctgcctatgctaagctgtgcagtgggcatgaaagcttgagctctgctctgcctcgtg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctgcctatgctaagctgtgcagtgggcatgaaagcttgagctctgctctgcctcgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)