CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCTGTCCTCCCTGCTGCTCCCAACTAGCCCATCATAAACTCTCCC
CCAACAAGTGTGCATTACCCAGTCACTGTGGAGGAGGAAAGGAAGGAGAG
CATAGGTATTACGTAAGCTTTAGGAGATACTTACTGAAGGAAATGGGAAA
AGGTATAACTAACATTCTATTGGGGGGGAGGTAAATTAATAATGAAGTCA
CACAGAAAGAGTTGGATGCTAAGGAACAGGGGAATTTCATTAACATTGAG
GGCAAATTCATCCCATCCCACCCAGACACTTGTGTTCCAGCAAGAAAGAG
TTAATGACCTGCCACGTACTGACATCACATCTTTTACTGCCAGCATTGAG
ATTCATCCACACATGGACGAGCTTTTATGAAAATCTACATCTTCCATGAA
CACTTCCCTGGCTCCACAGCATTCTGTTCCTGTTACAGGGTTAGTATTAA
AGTAGCCTTCACAGATAGAGAGCTGAAGTCATTTTCATGATTTCTTTTCC
CTCCTGGCTTTACATCTTCATCTTACGATTTTCTTCTGACTCACTCATAG
TGTAAATTCTTTATAAATAGGGCTTATTCATATCATTTTCTTTTTTCCTT
ATGATCAACTGGTAGAAACTACAGACATATCACCCACTACATAGCGATGA
A

GTTTGTTCTGTTTCTTTCTTAGTTGTTTTAGGGCGGGCCTTTTTTACGGT
TCGTGATGGCGGGCGGGTTTATACCCCTTCTAGATTGCATTTGTTCCAAT
GACTCTTTTTTTGTTAACTGATTTTGATGTTTGTCGTGTGGGTCGGCGCG
GGGCGGTCAATGAGTTTCGGGGGGTGGGCGGATTGGCGGGGTGTTAGTTG
TTGCGCCGCTGTTACTGTGGCTTTACGTTTTTTAAGGGGTGTTATGTGTT
CGCTTTTCTTTCTTCTCTCCTATTTGCCGCGTTGGCATTCGTCGTTTTCG
CGGAAATCGTCGCGATTGGGGTGAATTGGTTGTGGTGCGTGGGGGATCTG
GGTGGGGTTTAGTGTGTGAACGCGCGCCCGGCGCCGTGTGTTGCCGTCGA
TTTATCGCGTTCGTCGCCGGCCTTGCTTTTTTTTTTGCCTCCGCGCCCAC
CTGAGAATGGCGGATAGGGGTGTGGGTTTTTACTTTTTACAGTAAAGCCG
CCGCGACTCGTTTTGGGGGGGGTTTATTCGGCCTTTTTGCCCCGCCCGAA
TCGGGCGTGCGTTTTGTCCTGTTCCCGGTTTTTTTTTTTGTTGGCGGTGT
GGTTTTTTTTTCGCCGCCCGCGCATTATTATTGGTTTCCCGCCCATTGGG
ACATAATAAAAGATATGAGGTAGTGGGAGGGGGTGGGGGTGTGGGCGGTT
GTGTTTTTCTGCCTTTTTTTGGCTTTCCCCGTCGGCACGTTCGGCGCGGT
CATTCACGTCCTTATACTGCGTTGTGTGTGGGTTTTTTAGGTCGCGCGCC
GGGTTTTGAATTCGGGGGGGCGGGAAAGAAAAAGTGAAAAGGGGTGCGAG
TGTGTCTATGTGGTTTTTGTGCATCTTTGGAGCGGGGAAAGTGTTGTGTG
TTG

Query= MSMg01no197_o11.b1 MSMg01no197_o11.b1 CHROMAT_FILE:
MSMg01no197_o11.b1 PHD_FILE: MSMg01no197_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:57 2005
         (613 letters)



>mm_chr4_14550830_14551843
          Length = 1014

 Score =  986 bits (510), Expect = 0.0
 Identities = 587/616 (95%), Gaps = 6/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcctgtcctccctgctgctcccaactagcccatcataaactctcccccaacaa 63
           |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 199 ggaattctcctgtcctgcctgctgctcccaactagctcatcatgaactctcccccaacaa 258

                                                                       
Query: 64  gtgtgcattacccagtcactgtggaggaggaaaggaaggagagcataggtattacgtaag 123
           ||| ||||||  | ||||||| | |||||||||||||||||||  |||||||||| || |
Sbjct: 259 gtgcgcattaatcggtcactgcgaaggaggaaaggaaggagagtgtaggtattacatatg 318

                                                                       
Query: 124 ctttaggagatacttactgaaggaaatgggaaaaggtataactaacattctattgggggg 183
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 319 ctttaggagatacttaatgaaggaaatggaaaaaggtataactaacattctatcgggggg 378

                                                                       
Query: 184 g------aggtaaattaataatgaagtcacacagaaagagttggatgctaaggaacaggg 237
           |      |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggggggaaggtaaattaataatgaagtcacacagaaagagttggatgctaaggaacaggg 438

                                                                       
Query: 238 gaatttcattaacattgagggcaaattcatcccatcccacccagacacttgtgttccagc 297
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 439 gaatttcattaacattgagggcaaattcatcccatcctgcccagacacttgtgttccagc 498

                                                                       
Query: 298 aagaaagagttaatgacctgccacgtactgacatcacatcttttactgccagcattgaga 357
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagaaagagttaatgacctgccatgtactgacatcacatcttttactgccagcattgaga 558

                                                                       
Query: 358 ttcatccacacatggacgagcttttatgaaaatctacatcttccatgaacacttccctgg 417
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttcatccacatatggacgagcttttatgaaaatctacatcttccatgaacacttccctgg 618

                                                                       
Query: 418 ctccacagcattctgttcctgttacagggttagtattaaagtagccttcacagatagaga 477
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 619 ctccacagcattctgttcctgttacagggttagtattcaagtagccttcacagatagaga 678

                                                                       
Query: 478 gctgaagtcattttcatgatttcttttccctcctggctttacatcttcatcttacgattt 537
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 679 gctgaagtcattttcatgattttttttccctcctggctttacatcttcatcttacaattt 738

                                                                       
Query: 538 tcttctgactcactcatagtgtaaattctttataaatagggcttattcatatcattttct 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tcttctgactcactcatagtgtaaattctttataaatagggcttattcatatcattttct 798

                           
Query: 598 tttttccttatgatca 613
           ||||||||||||||||
Sbjct: 799 tttttccttatgatca 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1014
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1004
Effective search space:   605412
Effective search space used:   605412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)