TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAATTGCTCCCTTCTTTTCTTCTTGTACATAGCTCAAGTCCAAGT
GAACCAAGGACCTCCACATAAAACCAGATACACTGAATCTAATAGGAGAG
AAAGTATAGAAAAGCCTCAAACACATGGGCACAGGGGAAAAGTTCCTGAA
CAAAACACCAATGGCTTATGCTCTAAGATCAAGAATCAACGAATGGGACC
TCATAAATTTGCAAAGCTTCTGTACAACAAGGACACTGTCAATAGGACAA
AATGGCAACCAACAGATTGGGAAAAGATCTTTACCAATCCTACATCAGAT
AGAGAGCTAATATCCAATATATAAAAAGAACTCAAGAGGTTAGACTCCAG
AGAACCAAATAACCCTACCTAAAAATGGAGAACAGATCTCAACAGAGAAT
TCTCCACTAAGGAACCTCGAAGGGCTGAGAAGTACCTAAAGAAATGTTCA
ACATCCTTAGTCATCAGGGAAATGCAAATCAAAACCACCCTGAGATTCCA
CCTCACTCCAGTCAGAATGGCTAAGACGAAAAACTCAGGTGACAGCAGAT
GCTAGTGAGGATGTGGAGAAACAGGAAAACTCATCCATTGTTGCTAGGAT
TGCAAACTGGTACAACCACTCTGGAAATAAGTCTAATGGTTCCTCAGAAA
GTTGGGCATAGTCCTACCTGAGGACTATACCACTCCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGTAGTTACAGCTATATAGAAA
GACCCTGTCTCAAAACAGATTTCAATAGAGTAATAATTACTGCATAAATC
TAAAATCACTATTCGAAATCAAATAAAATCATTATTTGTCAAGTGAAAAA
AAAAAGAAAACTCTCTATTCCATTGTTTTTTTCCCTCATCTGTCCCTTTC
TCAATAGAATATCATTATATAGCTCAACCTTATCTCAGTCTTGTAGTCCA
CTTACCTTAGACTACAAAGTGGCAGTATTATAAAGGTTCACCTACACTCT
TGACCTTCTCTCAATTAAGCAATACTTCAGTTAGCCATCACAATAAAATT
GTCCCTCTTGATTTATATGCCACATGACTTATCCAGAGCTATCCAGTTAA
CAAGTCACAAAATAATAACATCTATATAACAATTTCTATATAACCTCATA
ATACATTCAAACACATTATGTAAAGCCCAATGCACACTAGAAGTACTCTG
GCTCAATACATATGCAAGTATATATTTCTTATCTTATAAATAGGAATAAA
AATTTTAGTAATTTATTACAGCAAGATAAATTAAAGTAGACTGCTGTTAG
ATTTATTAATTTATTACAGCAATATAAATTAAAGTAGACTGCTGTTCTTG
TTAGATATAACATATCTTACAAGAACTATATGTTAGAGTT

Query= MSMg01no204_h18.g1 MSMg01no204_h18.g1 CHROMAT_FILE:
MSMg01no204_h18.g1 PHD_FILE: MSMg01no204_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:02 2005
         (609 letters)



>mm_chr4_71349838_71350846
          Length = 1009

 Score = 1147 bits (593), Expect = 0.0
 Identities = 605/609 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtagttacagctatatagaaagaccctgtctcaaaacagatttcaatagagtaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtagttacagctatatagaaagaccctgtctcaaaacagatttcaatagagtaataa 260

                                                                       
Query: 61  ttactgcataaatctaaaatcactattcgaaatcaaataaaatcattatttgtcaagtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttactgcataaatctaaaatcactattcgaaatcaaataaaatcattatttgtcaagtga 320

                                                                       
Query: 121 aaaaaaaaagaaaactctctattccattgtttttttccctcatctgtccctttctcaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaaaaagaaaactctctattccattgtttttttccctcatctgtccctttctcaata 380

                                                                       
Query: 181 gaatatcattatatagctcaaccttatctcagtcttgtagtccacttaccttagactaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatatcattatatagctcaaccttatctcagtcttgtagtccacttaccttagactaca 440

                                                                       
Query: 241 aagtggcagtattataaaggttcacctacactcttgaccttctctcaattaagcaatact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtggcagtattataaaggttcacctacactcttgaccttctctcaattaagcaatact 500

                                                                       
Query: 301 tcagttagccatcacaataaaattgtccctcttgatttatatgccacatgacttatccag 360
           |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||
Sbjct: 501 tcagttagccatcacaataaaattgtccctcttgatttatatgtgagatgacttatccag 560

                                                                       
Query: 361 agctatccagttaacaagtcacaaaataataacatctatataacaatttctatataacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agctatccagttaacaagtcacaaaataataacatctatataacaatttctatataacct 620

                                                                       
Query: 421 cataatacattcaaacacattatgtaaagcccaatgcacactagaagtactctggctcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cataatacattcaaacacattatgtaaagcccaatgcacactagaagtactctggctcaa 680

                                                                       
Query: 481 tacatatgcaagtatatatttcttatcttataaataggaataaaaattttagtaatttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacatatgcaagtatatatttcttatcttataaataggaataaaaattttagtaatttat 740

                                                                       
Query: 541 tacagcaagataaattaaagtagactgctgttagatttattaatttattacagcaatata 600
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tacagcaatataaattaaagtagactgctgttagatttattaatttattacagcaatata 800

                    
Query: 601 aattaaagt 609
           |||||||||
Sbjct: 801 aattaaagt 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)