Query= MSMg01no207_b02.b1 MSMg01no207_b02.b1 CHROMAT_FILE:
MSMg01no207_b02.b1 PHD_FILE: MSMg01no207_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:31 2005
(335 letters)
>mm_chr4_84001709_84002445
Length = 737
Score = 605 bits (313), Expect = e-177
Identities = 332/341 (97%), Gaps = 6/341 (1%)
Strand = Plus / Minus
Query: 1 gcaaacagcccccagcccccttagtagttcatgaaaagggagttcactttcttgccttgt 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gcaaacagccagcagcccccttagtagttcatgaaaagggagttcactttcttgccttgt 597
Query: 61 gttcccttctgagtcagtgtaactgccagatagc----tgtttgtttgtttgtttgttta 116
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 596 gttcccttctgagtcagtgtaactgccagatagctgtttgtttgtttgtttgtttgttta 537
Query: 117 tcagctctaataactagaatatacttcaggaattggtgaaacagcatttggaatgaaatg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tcagctctaataactagaatatacttcaggaattggtgaaacagcatttggaatgaaatg 477
Query: 177 tctggaaattactagaatcaagaacagaggctaactcagtggggaccattagtagtgaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tctggaaattactagaatcaagaacagaggctaactcagtggggaccattagtagtgaaa 417
Query: 237 agaagcaattcggttaataattacttatttctctttcagtgtaaaagatcacttaaaaaa 296
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 416 agaagcaattcggttaataattacttatttctctttcagtgtaaaagagcacttaaaaaa 357
Query: 297 aaa--cttctgtgagcatcaagaaatgggttgcttgcttac 335
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaaaacttctgtgagcatcaagaaatgggttgcttgcttac 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 737
Length adjustment: 9
Effective length of query: 326
Effective length of database: 728
Effective search space: 237328
Effective search space used: 237328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_b02.g1 MSMg01no207_b02.g1 CHROMAT_FILE:
MSMg01no207_b02.g1 PHD_FILE: MSMg01no207_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:31 2005
(383 letters)
>mm_chr4_83870473_83871255
Length = 783
Score = 681 bits (352), Expect = 0.0
Identities = 373/384 (97%), Gaps = 8/384 (2%)
Strand = Plus / Plus
Query: 1 ccagaacatcagacacacccgtggtcaaaagtaagtagggtccacacccaagccaacccc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 ccagaacatcagacacacccgtggtcaaaagtaagtagggcccacacccaagccaa---- 256
Query: 61 g----ttgggaaccctagctcctttctgttcacagttagacaccggctctgccttctctc 116
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gggtgttgggaaccctagctcctttctgttcacagttagacaccggctctgccttctctc 316
Query: 117 tctttccccttcctgtgcaatctactaatcttgaagaaagaaagttataaacgccacact 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctttccccttcctgtgcaatctactaatcttgaagaaagaaagttataaacgccacact 376
Query: 177 ccctccctgaggcaatcatgggggactctctcccatcccactcaatggcatctgatagag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccctccctgaggcaatcatgggggactctctcccatcccactcaatggcatctgatagag 436
Query: 237 agaaagaaaggaaacagacaaagaagtgcttgctactttatttaggtccttggggtcctt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 437 agaaagaaaggaaacagacaaagaagtgcttgctactttatttaggtccttggggtcatt 496
Query: 297 ggtatttcctgatgccaaataattttgctctgctgatatcttaagagaactgtcaagggt 356
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 497 ggtatttcctgatgccaaataattttgctctgctgagatcttaagagaactgtcaagggt 556
Query: 357 agatgtgctttttgaagcttggca 380
||||||||||||||||||||||||
Sbjct: 557 agatgtgctttttgaagcttggca 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
