Query= MSMg01no213_g13.b1 MSMg01no213_g13.b1 CHROMAT_FILE:
MSMg01no213_g13.b1 PHD_FILE: MSMg01no213_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:25 2005
(292 letters)
>mm_chr4_116721128_116721819
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 5 gaattccacttgggagcagaacgggtaaccagaatgtctacccatgaagcaagactgcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaattccacttgggagcagaacgggtaaccagaatgtctacccatgaagcaagactgcac 396
Query: 65 aaacaaggccgagaacacaaataagactgtgaactttgatttctcaaaaattatgtcaca 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaacaaggccgagaaaacaaataagactgtgaactttgatttctcaaaaattatgtcaca 336
Query: 125 ttcaaatattcctacttgatttttacttctctgattgacgtttctatcttttctacagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttcaaatattcctacttgatttttacttctctgattgacgtttctatcttttctacagtt 276
Query: 185 tttattcattccaagagtaaaactgtactcctactccataaaaagtgttacacttgggcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tttattcattccaagagtaaaactgtactcctactccataaaaagtgttacacttgggcg 216
Query: 245 ttcaaaattctaacccattttatgaagttagcatgatcctgatgccaa 292
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttcaaaattctaacccattttatgaagttagcatgatcctgatgccaa 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no213_g13.g1 MSMg01no213_g13.g1 CHROMAT_FILE:
MSMg01no213_g13.g1 PHD_FILE: MSMg01no213_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:25 2005
(236 letters)
>mm_chr4_116596194_116596829
Length = 636
Score = 412 bits (213), Expect = e-120
Identities = 231/237 (97%), Gaps = 2/237 (0%)
Strand = Plus / Plus
Query: 1 agtaatgttttattcataataacaagtggctggctagatttgtcctac-ggcttgcagct 59
||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||
Sbjct: 201 agtaatgttttattcataaaaacaagtggctggctagatttgtcctaccgg-ttgcagct 259
Query: 60 tccaagtctctgcctattcccttaccgccattactgtgcttttcagctgctgtgagtgtc 119
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 260 tctaagtctctgcctattcccttaccaccattactgtgcttttcagctgctgtgagtgtc 319
Query: 120 atgctactaaagtaaaaagaagtatgtctgtgcagattgtcctaaacttagctaacggaa 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgctactaaagtagaaagaagtatgtctgtgcagattgtcctaaacttagctaacggaa 379
Query: 180 gccctttccaattggagtttagttctcttaacatattgtcttttagaacctcctgga 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gccctttccaattggagtttagttctcttaacatattgtcttttagaacctcctgga 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
