XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCGAGCGGGGCGGAATTC
TCTGCCCTGACATAACGAATGTTGAATTCCTCATCCTTTAAGCACGATCT
GATCAGCTTCCTCAACCGCATGGTTCCTGCTTTAAGTTTGCCGTTCTCCA
GTTCCCCAACTAAATCTCCCTTGAGTTTCTCCCAAGAAGGGATAGTTAAG
GACCTTGAGCACGCAAACCACGGTGCTATGCGATCTACCTCTTTTATTAA
GCCTTCTAGTGTCTTGGTGGCGACTTTCAAGCCACGCTGCCTCAGGACCG
ACGGTAAGGCTTNAATCACAGAGTGGGAGGCCCCCATGCTATCTTCTTGC
CTTTTTCTAACCGCGCCCGACCTCGACTGAACACCAGTTAGCAATTCCAC
CGGTGGAAACAACACGCAATCAAAAAGAAAAGGAACGAGCCCTGTGAAAA
GGAACAGAAAGGCTTCTAACGCTGGAGAAAGTTCAAGGCCAGACATACCT
TGTAAAGCTGTAAAGTCCTGTAGTTCTGAACCCGCCCCGTGAAACGGGGG
GAGGGGGTTGTGCCCCCCCTTTTTTTTCATTCCTTTTTACCCCCTTCACC
ATTTCATTTTATCGTCACTTTTTTTATATACCCGTGACCCCTTTTTTTTT
TTTTCTTTCCCAACACATTTTCCCCTTTTACCTCTCTTATTACCCTTTTC
CTTTTTTTTCCCCCTCCCCCCTTTTTG

TACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCACTGTTGTGCAGTGACAGGCCCAGCACTC
ACCAGGGACAAGGAGTGCCGAGCAAACTGTCACTGATGTCCAACCTCCCC
CAAAGGACTCTGCCCCTCCCCACACTTTGGCCCTGGCAGCTGCTGTGACT
AATTCCAGGTTCTTCCTTGTTGTCAGGTTTCAGCACTCTGACTTCCTCTT
GCCCGGGCAGCTCTGGCTGAAGACAGACATTAATCTTCAAGGAGAAGGGC
AGCCTCGTGGGAAGGCTCCTGACTGATTCACTGCCAGGACTAATAGCAAC
AGCCAAGTTGTCCAGCATTTGACAAAAGGCTCCAGCCTCTCGCCCAGTAA
ATAACTGAATGCCTCCATTCCCACCCTCACCCATTCTTCCCTCGTCTTCT
GGAGGCCAGCACCTGAGCCTGACAAGCATCACACAGCCCAGCGTCCCAGA
CCTACAGACAGGATGTAGAGGGAACACTTCCAAGCTGCTTATCCCACTCT
CACTACCCTCTCCCCAGTAAGAGGGAAACACTGGTTCTAAAAAGGAACCT
AAAAATCTGGTTTGGTTTGGTTTGGCTTGGTTTGGTTTGCCCCCCTTACC
CCCCAACCTTTCATTTTCACATACCCTCGCCTCCATTCCCATCCCTTACC
CCCCTTTTCTTTCTT

Query= MSMg01no213_h13.g1 MSMg01no213_h13.g1 CHROMAT_FILE:
MSMg01no213_h13.g1 PHD_FILE: MSMg01no213_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:30 2005
         (556 letters)



>mm_chr4_53913061_53914016
          Length = 956

 Score = 1025 bits (530), Expect = 0.0
 Identities = 548/554 (98%)
 Strand = Plus / Minus

                                                                       
Query: 2   actgttgtgcagtgacaggcccagcactcaccagggacaaggagtgccgagcaaactgtc 61
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 755 actgttgtgcagtgacaggcccagcactcaccagggacaaggagtgctgagcaaactgtc 696

                                                                       
Query: 62  actgatgtccaacctcccccaaaggactctgcccctccccacactttggccctggcagct 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 actgatgtccaacctcccccaaaggactctgcccctccccacactttggccctggcagct 636

                                                                       
Query: 122 gctgtgactaattccaggttcttccttgttgtcaggtttcagcactctgacttcctcttg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gctgtgactaattccaggttcttccttgttgtcaggtttcagcactctgacttcctcttg 576

                                                                       
Query: 182 cccgggcagctctggctgaagacagacattaatcttcaaggagaagggcagcctcgtggg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cccgggcagctctggctgaagacagacattaatcttcaaggagaagggcagcctcgtggg 516

                                                                       
Query: 242 aaggctcctgactgattcactgccaggactaatagcaacagccaagttgtccagcatttg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 515 aaggctcctgactgattcactgccaggactaatagcaacagccaagttgcccagcatttg 456

                                                                       
Query: 302 acaaaaggctccagcctctcgcccagtaaataactgaatgcctccattcccaccctcacc 361
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 455 acaaaaggctccagcctctcgcccagtaaataactgaatgcctctattcccaccctcacc 396

                                                                       
Query: 362 cattcttccctcgtcttctggaggccagcacctgagcctgacaagcatcacacagcccag 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cattcttccctcgtcttctggaggccagcacctgagcctgacaagcatcacacagcccag 336

                                                                       
Query: 422 cgtcccagacctacagacaggatgtagagggaacacttccaagctgcttatcccactctc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cgtcccagacctacagacaggatgtagagggaacacttccaagctgcttatcccactctc 276

                                                                       
Query: 482 actaccctctccccagtaagagggaaacactggttctaaaaaggaacctaaaaatctggt 541
           ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 275 actaccctcaccccagtaggggggaaacactggttctaaaaaggaacctaaaaatctggt 216

                         
Query: 542 ttggtttggtttgg 555
           ||||||||||||||
Sbjct: 215 ttggtttggtttgg 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)