Query= MSMg01no233_h07.b1 MSMg01no233_h07.b1 CHROMAT_FILE:
MSMg01no233_h07.b1 PHD_FILE: MSMg01no233_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:09 2005
(326 letters)
>mm_chr4_7088154_7088879
Length = 726
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%)
Strand = Plus / Plus
Query: 15 gaattcaaccttaaatttaaagaattttgaaaattctttctaaaacaggttcataccacc 74
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 215 gaattcaaccttaaatttaaagaattttgaaaattctttctaagacagcttcataccacc 274
Query: 75 ccagtctagcttccccagtgcagagggtacaggcatgttctgctcttctttgtttacctt 134
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccagtctagcttcccaagtgcagagggtacaggcatgttctgctcttctttgtttacctt 334
Query: 135 ttagtaaatataaactgtgggcataaaacataagtggtgtgctcttttagtgacgtgtaa 194
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 335 ttagtaaatataaactgtgggcataaaacataagtggtctgctcttttagtgacatgtaa 394
Query: 195 ctcttatgtaggcatgaaataagcattatagctagtttatagtatttctattaaggtaca 254
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 395 ctcttatgtaggcatgaaataagcattatagctagtttatagtatttctgttaaggtaca 454
Query: 255 gagactggttcttaccgtccttctagctgaggccatattttgagtttgttttgctatttc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gagactggttcttaccgtccttctagctgaggccatattttgagtttgttttgctatttc 514
Query: 315 ttctacttatat 326
||||||||||||
Sbjct: 515 ttctacttatat 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_h07.g1 MSMg01no233_h07.g1 CHROMAT_FILE:
MSMg01no233_h07.g1 PHD_FILE: MSMg01no233_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:09 2005
(289 letters)
>mm_chr4_7274935_7275619
Length = 685
Score = 495 bits (256), Expect = e-144
Identities = 277/286 (96%), Gaps = 4/286 (1%)
Strand = Plus / Minus
Query: 1 tttggcaaatactcagggttgggagaagaaaaataaccactttacatggaagcacatgac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttggcaaatactcaggattgggagaagaaaaataaccactttacatggaagcacatgac 423
Query: 61 acagaggcagagtctccagcagttagttaaatgagggaaggctggcaagattatttgaga 120
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 422 acagaggcagagtctccagc----agttaagtgagggaaggctggcaagattatttgaga 367
Query: 121 gcaagattgtgttttccaagattagcaatgagtttaacaatgaacttctatcaatgctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcaagattgtgttttccaagattagcaatgagtttaacaatgaacttctatcaatgctca 307
Query: 181 aagagaagattgtaaactgcctactttgcaaagattcgtttgtcagcactagttgcagcg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 306 aagagaagattgtaaactgcctactttgcaaaggttcgtttgtcagcactagttgcagcg 247
Query: 241 ttgtgctaacattgatgtaaaaccaaagcagtcaccctacaattta 286
| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 246 tcgtgctaacaatgatgtaaaaccaaagcagtcaccctacaattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 685
Length adjustment: 9
Effective length of query: 280
Effective length of database: 676
Effective search space: 189280
Effective search space used: 189280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
