Query= MSMg01no233_n05.b1 MSMg01no233_n05.b1 CHROMAT_FILE:
MSMg01no233_n05.b1 PHD_FILE: MSMg01no233_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:37 2005
(331 letters)
>mm_chr4_3457806_3458536
Length = 731
Score = 629 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Plus
Query: 5 gaattcacctattgagccactgtcttccctgcaagatatttttgttatataatctttttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctattgagccactgtcttccctgcaagatatttttgttatataatctttttt 264
Query: 65 aactggtctggtctaaaaaatactgtctctgtgtgtgcatgtgtgtttgcatgtctcttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aactggtctggtctaaaaaatactgtctctgtgtgtgcatgtgtgtttgcatgtctcttt 324
Query: 125 gtgtatgtttacatgaggacatcaaaagacagctggaggtgcgacatgtcacaaaccttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtatgtttacatgaggacatcaaaagacagctggaggtgcgacatgtcacaaaccttg 384
Query: 185 cttcctgagactgggtctcacacaagtctggagttcattgattcagctaggctaattgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttcctgagactgggtctcacacaagtctggagttcattgattcagctaggctaattgac 444
Query: 245 cagtaagactcggggagctacatgcttccaccttctcagtgctgagagtatgtgcacaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagtaagactcggggagctacatgcttccaccttctcagtgctgagagtatgtgcacaca 504
Query: 305 tcaccatgccctacttttttacctg 329
|||||||||||||||||||||||||
Sbjct: 505 tcaccatgccctacttttttacctg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_n05.g1 MSMg01no233_n05.g1 CHROMAT_FILE:
MSMg01no233_n05.g1 PHD_FILE: MSMg01no233_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:37 2005
(286 letters)
>mm_chr4_3502994_3503678
Length = 685
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 agcgcagcctggtcccatcttatattccattacctaccagcatctaataccgagcataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 485 agcgcagcctggtcccatcttatattccattacctaccagcatctaata-ggagcataaa 427
Query: 61 aaagaactttactgaattaaatgtacacctgagcgttgggagtcatttttgtctgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaagaactttactgaattaaatgtacacctgagcgttgggagtcatttttgtctgcttct 367
Query: 121 gtaaaagcctgtctgttaggcggagtcaaggcaggtcaggctgacagatttcctggcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtaaaagcctgtctgttaggcggagtcaaggcaggtcaggctgacagatttcctggcctg 307
Query: 181 ccaacggcatggaacaaaaagctacaactgaggctcaaggagaggggctgaacgttcgat 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 306 ccaacggcatggaacaaaaagctacaactgaggctcaaggagagaggctgaacgttcgat 247
Query: 241 taatctttgtggaaggaacagggaggcctccggatgggaacagata 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taatctttgtggaaggaacagggaggcctccggatgggaacagata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
