Query= MSMg01no263_e12.b1 MSMg01no263_e12.b1 CHROMAT_FILE:
MSMg01no263_e12.b1 PHD_FILE: MSMg01no263_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:09 2005
(318 letters)
>mm_chr4_63739190_63739906
Length = 717
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 4 ggaattctagcataacaaaaggcttgagagacttcctggatgacacacatctttgctcag 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagcaaaagaaaaggcttgagagacttcctggatgacacacatctttgctcag 263
Query: 64 agacaccaaagcacgagtactggaaaacttcagcctagagcgagaggctgtccactcctg 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agacaccaaagca-gagtactggaaaacttcagcctagagcgagaggctgtccactcctg 322
Query: 124 tgttaagggcggctgaagcagcagcagcatttgagatgcccacgttgctagggtggtgtt 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 tgttaagggcggctgaagcagcagcagcatttgagatgcccacattgctagggtggtgtt 382
Query: 184 tgtaagataattttctgaagcttgagttggcttggctgaaaagaccagccataagacaca 243
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 383 tgtaagataattttctaaagcttgagttggcttggctgaaaagaccagccatgagacaca 442
Query: 244 tgagggaggaattctttctaagcatatgacaaggaattattattaatatcttatagggtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgagggaggaattctttctaagcatatgacaaggaattattattaatatcttatagggtc 502
Query: 304 tttcatagctgg 315
||||||||||||
Sbjct: 503 tttcatagctgg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_e12.g1 MSMg01no263_e12.g1 CHROMAT_FILE:
MSMg01no263_e12.g1 PHD_FILE: MSMg01no263_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:09 2005
(407 letters)
>mm_chr4_63892414_63893220
Length = 807
Score = 748 bits (387), Expect = 0.0
Identities = 402/407 (98%)
Strand = Plus / Minus
Query: 1 tttgaaataagctctgacttcaactcaatgctaaaattagggtcagaagaatttgctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tttgaaataagctctgacttcaactcaatgctaaaattagggtcagaagaatttgctatg 548
Query: 61 gaaccagatctcctatgaaaaagcccttagaccttgaggaaaacagttcactcactggga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 547 gaaccagatctcctatgaaaaagcccttagaccttgaggaaaacagttcactcattggga 488
Query: 121 atgtcatcaccaactactacaccacatatattttcagatccattccaatgaaagggacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atgtcatcaccaactactacaccacatatattttcagatccattccaatgaaagggacca 428
Query: 181 tatctggtttatcttcacgccccagcacatgatacctggtcagatatttattggtgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tatctggtttatcttcacgccccagcacatgatacctggtcagatatttattggtgtcta 368
Query: 241 ctgtggtttgaatatgttatgttaccctctaaaagctatgctaattcctatgctgatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctgtggtttgaatatgttatgttaccctctaaaagctatgctaattcctatgctgatgtt 308
Query: 301 gaaaactgaaggctataaatgatgagtagaggtgccaatacccttctcagatgcattttc 360
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 307 gaaaactgaaggctataaatgatgagtagaggtgccaatagtcttctcagaggcattttc 248
Query: 361 ctaagaatgcattgctgtacactaagtctgcctgctacttttactcc 407
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 247 ctaagaatgcattgttgtacactaagtctgcctgctacttttactcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
