Query= MSMg01no264_b11.b1 MSMg01no264_b11.b1 CHROMAT_FILE:
MSMg01no264_b11.b1 PHD_FILE: MSMg01no264_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:11 2005
(234 letters)
>mm_chr4_150396999_150397632
Length = 634
Score = 377 bits (195), Expect = e-109
Identities = 225/235 (95%), Gaps = 2/235 (0%)
Strand = Plus / Minus
Query: 1 aaacaagaaatgtttattctcacagtatggaaggg-tgcagtgcctagggtcaaggtcag 59
||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |
Sbjct: 434 aaacaagaagtgtttattctcacagtatggaagggct-cagtgcctagggtcaaggtcgg 376
Query: 60 gaagggacaggattcagtgagagcaatggctctgctcctgagaaggagcttgaatccccc 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 375 gaagggacaggattcagtgagagcaatggctctgctcctgagaaggagctcgaatccccc 316
Query: 120 acctcctccagagcaaaaggaaaaactctcccgttgtgacagaaggacagacaacaaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acctcctccagagcaaaaggaaaaactctcccgttgtgacagaaggacagacaacaaaaa 256
Query: 180 gaacttagctagttttttttcttacctcatgtttttgagatggagccttgcagtg 234
|||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 255 gaacttagctagttccctcccttacctcatgtttttgagatggagccttgcagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_b11.g1 MSMg01no264_b11.g1 CHROMAT_FILE:
MSMg01no264_b11.g1 PHD_FILE: MSMg01no264_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:11 2005
(161 letters)
>mm_chr4_150212521_150213081
Length = 561
Score = 257 bits (133), Expect = 2e-73
Identities = 154/161 (95%)
Strand = Plus / Plus
Query: 1 cctccactttacgtaggtatagtaggcattgaagtcttcaggtatatcctgcctctgagt 60
|||||||||||||||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 201 cctccactttacgtaggtatagtaggcattgaagtcttcagggaaattttgcctctgagt 260
Query: 61 tttctgtggtacttgagtttggttattaatttttatatgaatgaacaaatgtaactgctg 120
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tttctgtgttacttgagtttggttattaatttttatatgagtgaacaaatgtaactgctg 320
Query: 121 taggtcagtttcaaaggttaaaaacactcacagatacacac 161
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggccagtttcaaaggttaaaaacactcacagatacacac 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
