TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCCTTCATGTAGCCCTAGACTCTCTAGTCAAAGTACAGTGGATA
GACCAGGAACATCAGATGAACGGTGAACTTGTTAGAAAAGCAGGCTCCAA
GGCCACATACGAGAGCCTTGGAACTAGAATCTATATTGTAAGAATTCCCC
GTGTCAGTGCAAACATCAGAAAGAACAAAGCCCTGTTCTGTTCCTATGGC
TAGTATTTTACCTCAGAGGAGGAGCCTGGTTTCTCACAGGTGATCTGATT
TATCCCAATTCAAACTTTATCAGAGCACAAGGACAACCATCTGACGTCTT
AGATTTTTATTTTTCTGCTGTCCCACCCCGTGCAATGGATTGAAAACAAA
ACAAAAAACAAACAATGACAAAATCCTACACCTATGGCAGACATCAGTAG
CTGATTGCAGGACTTTCATCCCAGACCTAGATCTAGCTTCCAAATGTTAA
GTGTTCAAGGCAGCCATCACTGATAATAGACTTTGCCCGGTAGAATTTTC
TAGTAGCTATTCAACTTCTCATTCCTGGGAAAGGACAGTGAAATGTCAGC
ATGTCTTCTCTTCATGTTTTATGTCACAAACTTTCTAAGTACATATTCTA
GGACAAGAACTTCTTTCCTAGAACCTAAGTCTTCTTGTCAGTACAGCAAT
AACTAAGCCAGAAGACCTCTTCTGAGGTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCAGCGAACGGTGGAGAGCTACTGAA
CCCTTCAGAGCACTGCCTGATGCACCCGGGCTGAAGAGCGCTGCGGAGCA
ACTGTGCTCTTAAACGATCTGCAGGCCCAGTGCCAGAAAGTGCTTGCAGA
AGAGAATTCTAGCTTGGTTTGAGCCATGACACTTGTCTGCAGTGGCTTTG
CTTTCTGAGGGGCCCAAAATAAGATACTAGCCAGTAAGGGAGGACCATGA
CTCAGAGAATCATAGATTCTGATAGCTGAAGAGCCTTCAGACACTCAGCA
CACACTTCTAATTTATTGTCTGGATGACCCCGCCTCATAGAGGTGAATTG
TCTCACCTGAGGCCATGAGGCTGAAGTCAGGGAAGCTGAGATTCACGTGA
ATGACTGTCTGACTCAGAAGCCTGCAGCATCTTCCCCATCCTCAGTTATT
GTATCAGACTAAAGCATCCTGTCCTCTGAGAGAAATAGATGTAGTAGGCA
CCTGCTGTGTACTATCCTGGCCCATCATGGGCTGGCAATGTAACTATCTT
GGGTTAAAACTCTTGTGCGTCAGATGTGACTCTGATTAACTAGTCCTTAT
AAGGTTAGTGTGTGTGTGTGTGTGTGTGTGAGCTTTTATTTATTTCTTTT
ATCTTCTGTCACCTTTTCTATATCTCCTTCATTTTTGTTTCTTTATTTTA
TTTT

Query= MSMg01no264_l15.b1 MSMg01no264_l15.b1 CHROMAT_FILE:
MSMg01no264_l15.b1 PHD_FILE: MSMg01no264_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
         (348 letters)



>mm_chr4_104652362_104653109
          Length = 748

 Score =  673 bits (348), Expect = 0.0
 Identities = 348/348 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcaatggattgaaaacaaaacaaaaaacaaacaatgacaaaatcctacacctatggcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gcaatggattgaaaacaaaacaaaaaacaaacaatgacaaaatcctacacctatggcaga 632

                                                                       
Query: 61  catcagtagctgattgcaggactttcatcccagacctagatctagcttccaaatgttaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 catcagtagctgattgcaggactttcatcccagacctagatctagcttccaaatgttaag 572

                                                                       
Query: 121 tgttcaaggcagccatcactgataatagactttgcccggtagaattttctagtagctatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgttcaaggcagccatcactgataatagactttgcccggtagaattttctagtagctatt 512

                                                                       
Query: 181 caacttctcattcctgggaaaggacagtgaaatgtcagcatgtcttctcttcatgtttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 caacttctcattcctgggaaaggacagtgaaatgtcagcatgtcttctcttcatgtttta 452

                                                                       
Query: 241 tgtcacaaactttctaagtacatattctaggacaagaacttctttcctagaacctaagtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgtcacaaactttctaagtacatattctaggacaagaacttctttcctagaacctaagtc 392

                                                           
Query: 301 ttcttgtcagtacagcaataactaagccagaagacctcttctgaggta 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttcttgtcagtacagcaataactaagccagaagacctcttctgaggta 344


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space:   250521
Effective search space used:   250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no264_l15.g1 MSMg01no264_l15.g1 CHROMAT_FILE:
MSMg01no264_l15.g1 PHD_FILE: MSMg01no264_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:59 2005
         (295 letters)



>mm_chr4_104501450_104502144
          Length = 695

 Score =  518 bits (268), Expect = e-151
 Identities = 286/292 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcagcgaacggtggagagctactgaacccttcagagcactgcctgatgcacccgggctg 60
           |||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 201 ttcagcgaacagtggagtgctactgaactcttcagagcactgcctgatgcatccgggctg 260

                                                                       
Query: 61  aagagcgctgcggagcaactgtgctcttaaacgatctgcaggcccagtgccagaaagtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagcgctgcggagcaactgtgctcttaaacgatctgcaggcccagtgccagaaagtgc 320

                                                                       
Query: 121 ttgcagaagagaattctagcttggtttgagccatgacacttgtctgcagtggctttgctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcagaagagaattctagcttggtttgagccatgacacttgtctgcagtggctttgctt 380

                                                                       
Query: 181 tctgaggggcccaaaataagatactagccagtaagggaggaccatgactcagagaatcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgaggggcccaaaataagatactagccagtaagggaggaccatgactcagagaatcat 440

                                                               
Query: 241 agattctgatagctgaagagccttcagacactcagcacacacttctaattta 292
           ||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 agattctgagagctgaagagccttcagacacccagcacacacttctaattta 492


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space:   196196
Effective search space used:   196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)