Query= MSMg01no265_c12.b1 MSMg01no265_c12.b1 CHROMAT_FILE:
MSMg01no265_c12.b1 PHD_FILE: MSMg01no265_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:34 2005
(441 letters)
>mm_chr4_30711307_30712146
Length = 840
Score = 737 bits (381), Expect = 0.0
Identities = 423/437 (96%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 5 gaattcctctgttggctaaggacttcacataaggatgaataaaggctctcagttctccaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattcctctgttgactaaggacttcacataaggatgaataaaggctctcagttctccaa 410
Query: 65 cagtgccttctgccccataaactatggctatctgagtatctgtgggggacactgattatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagtgccttctgccccataaactatggctatctgagtatctgtgggggacactgattatt 350
Query: 125 ttcaagtcaaactacactgccgtgaattctaaagcttactcatatttcttattcttctgt 184
||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttcaagt-taattacactgccatgaattctaaagcttactcatatttcttattcttctgt 291
Query: 185 ttttaatcccacttttaaagtgtttcatgcagtatgactcgtttagagaaagctcttata 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 290 ttttaatcccacttttaaagtgtttcatgcagtatgactcgtttggagaaagctcttata 231
Query: 245 acatccaaataaaataactttctgcttaatgtagaaaacattcatttatttcttgaaagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 acatccaaataaaataactttctgcttaatgtagaaaacattcatttatttcttgaaagt 171
Query: 305 ttccaaaagctttactgttctttcatttcccacacgtccaagtccaaagtctccacagac 364
|||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 170 ttccaaaagctttactgttccaacatttcccaaatgtccaagtccaaagtctccacagac 111
Query: 365 attaacatgcaactcacaacgctctgagaagaaagtgaggaagaagtaacatgcttctta 424
|||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 110 attagcatgcaactcacaaagccctgagaagaaagtgaggaagaagtaacatgcttctta 51
Query: 425 gacacagcggcaatgaa 441
|||||||||||||||||
Sbjct: 50 gacacagcggcaatgaa 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space: 358992
Effective search space used: 358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_c12.g1 MSMg01no265_c12.g1 CHROMAT_FILE:
MSMg01no265_c12.g1 PHD_FILE: MSMg01no265_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:34 2005
(286 letters)
>mm_chr4_30625688_30626373
Length = 686
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 1 attgctgagcatttttggattttgagctaatcattatgttcagctcgcagttgacatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgctgagcatttttggattttgagctaatcattatgttcagctcgcagttgacatttg 260
Query: 61 ggaaaggatctcaaccttttggagcatcctattctgtaaacataactcctaggcaggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ggaaaggatctcaaccttttggagcatcctattctgtaaacataactccaaggcaggcag 320
Query: 121 gagtgaagagattagagatggtatcagcttattccatgggaagaaaaccaataaagctac 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgaagagattagagatggtatcaacttattccatgggaagaaaaccaataaagctac 380
Query: 181 ctatgagcagaggtcacctttctccatttaatattaatgcattatgcaaaatacagttaa 240
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ctatgagcagaggccacctttctccatttaatattaatgcattatgcaaactacagttaa 440
Query: 241 aatctttattttattccagggataaatatcccaggaggatatttc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatctttattttattccagggataaatatcccaggaggatatttc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
