Query= MSMg01no266_b22.b1 MSMg01no266_b22.b1 CHROMAT_FILE:
MSMg01no266_b22.b1 PHD_FILE: MSMg01no266_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:49 2005
(374 letters)
>mm_chr4_77464689_77465460
Length = 772
Score = 681 bits (352), Expect = 0.0
Identities = 365/370 (98%), Gaps = 2/370 (0%)
Strand = Plus / Plus
Query: 5 ttaggtaacagctgagaatggcttggtgaagattgggaaaatccttacatatttattcac 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 ttaggtaacagctgagaatggcttggtgaagattggaaaaatccttacatatttattcac 264
Query: 65 agatgtggctaagttagttaatgggcagatttttaaaatggggacatttgaggaacagtg 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 agatgtggctaagttagttaatgggcagatttttaaaatggggaaatttgaggaacagtg 324
Query: 125 actttatcagagctttgtttactctacatcggcttatgctagtctatgtttatgtcacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actttatcagagctttgtttactctacatcggcttatgctagtctatgtttatgtcacaa 384
Query: 185 ttattcccgctgtaatataaagttttcacaatttcaatttattataatttaatgttttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttattcccgctgtaatataaagttttcacaatttcaatttattataatttaatgttttca 444
Query: 245 caattcaaagactgttaaacaatttttacattataataagaaattgaattatagctccct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caattcaaagactgttaaacaatttttacattataataagaaattgaattatagctccct 504
Query: 305 agctaggatgaaaaaaaaaaatcaatgtcctcttctctctgcccagacatttcaatctat 364
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctagggtgaaaaaaaaa--tcaatgtcctcttctctctgcccagacatttcaatctat 562
Query: 365 gctcaatgga 374
||||||||||
Sbjct: 563 gctcaatgga 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 772
Length adjustment: 9
Effective length of query: 365
Effective length of database: 763
Effective search space: 278495
Effective search space used: 278495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_b22.g1 MSMg01no266_b22.g1 CHROMAT_FILE:
MSMg01no266_b22.g1 PHD_FILE: MSMg01no266_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:49 2005
(633 letters)
>mm_chr4_77645235_77646267
Length = 1033
Score = 584 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Minus
Query: 328 atatagcagcttcaggatatgaaatcttgacttcaaactcttgattttgtgtagtaggat 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 atatagcagcttcaggatatgaaatcttgacttcaaactcttgattttgtgtagtaggat 974
Query: 388 taagttttgatcagggtgagagataaccttctagtttcatccttctatatttacctctcc 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 taagttttgatcagggtgagagataaccttctagtttcatccttctatatttacctctcc 914
Query: 448 agcttgtccagtaccatttggtaaagatactgcattttttccaatttacaattttccctt 507
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 913 agcttgtccagtaccatttggtaaagatactgcattttttccaatttataattttccctt 854
Query: 508 attataaaaatacagagtgttttgccctgaccagattgttcactatgcatcgttaataca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 attataaaaatacagagtgttttgccctgaccagattgttcactatgcatcgttaataca 794
Query: 568 ttccatgcctacttaaagaagactcctgtaactgccctttcatctatctattggatgggt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ttccatgcctacttaaagaagactcctgtaactgccctttcatctatctattggatgggt 734
Query: 628 cataga 633
||||||
Sbjct: 733 cataga 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
