TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAA
TAGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCAATCCCACTAAAA
TCAGGGAGTAGACAAGGCTGTCCACTCTCGCCCTACCTATTCAACATTGT
ACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGA
TACAAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTACAGATGATATG
ATAGTATATATAAGTGACCCTAAAAATTCTTTCAGAGAACTCCTAAGCCT
GATCAACAGCTTCAATGAAGTAGNNGCACANAACANAACTCACACAAGTC
AATGGNCTTTCTGTATACAAAGGATAAACAAAATAGAAAAGAAATTAGGG
AAACAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTG
ACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCT
GAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCT
CATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCA
ATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCCTCAA
CGAATTAGAAAGGGCAATCTGCAAATTCATCTGGAATAACAAAAAACCGA
GGATAGCAAAAACTCT

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACCAGCTGGTCTCACATGCACCAC
CTTTCTCCTTAGCTTTCTTCTCTGCCGCTGTGGCTGAAAGAGCAGAATTT
TGGCTTTCTTATTAGACTCAGCAGCAGCAGTAGCCGCAACAACCAAATCC
TAGTTCTTCCAAAATATCACTTCCCTTATTTCAATTTTTGTGTGGGACTA
AGTGACATATATTGCTCTGAGGGTGTTGGGGGACAGATAGAAAGTTCTTA
CTAATCTAGAAGTTACTTCATCAGACGCTTGGTTTTTCCAAACCATGTCT
ATAGGGATAATAGGATTGCTCTGAACAACAGCAGAGCAGTTGGTAGTGAT
AGAGCATCACTCTCAGGTTTCCCACCTGAAGTAACCGTCCTTTCTAGAAG
GCACCACATCTGGAGATAATATTTTTTGTAGTCTTTTTTTTGTTGTTGTT
GTTGTTGTTGTCTTCATGTTTTGAGGAGACTCTGGTATTGCCCAAATCAT
TAGGAGAAAAAGAATCTTCTTAACAGAAAGTCTTTGGGGAGTTATCTTCT
AAGGCCTTATTGTTCCCATGGGTTCAGGGTTCTTCATATGCCATGGCAGA
GTGTTATGGTTTCGACCAGTCTGGGGTAGGCCACACATGCCTAAAGGGCT
GATTGCTGAAAGGATGGGTTCTTTCCAGGGAATAAGATG

Query= MSMg01no267_b22.g1 MSMg01no267_b22.g1 CHROMAT_FILE:
MSMg01no267_b22.g1 PHD_FILE: MSMg01no267_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:05 2005
         (639 letters)



>mm_chr4_6295993_6297036
          Length = 1044

 Score = 1098 bits (568), Expect = 0.0
 Identities = 621/646 (96%), Gaps = 14/646 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagctggtctcacatgcaccacctttctccttagctttcttctctgccgctgtggctg 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 accagctggtctcacctgcaccacctttctccttagctttcttctctgcagctgtggctg 260

                                                                       
Query: 61  aaagagcagaattttggctttcttattagactcagcagcagcagtagccgcaacaaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aaagagcagaattttggctttcttattagactcagcagcagcagtagccgcaaaaaccaa 320

                                                                       
Query: 121 atcctagttcttccaaaatatcacttcccttatttcaatttttgtgtgggactaagtgac 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 atcctagttcttccaaaatatcacttcccttatttcaatttttgtgtgggcctaagtgac 380

                                                                       
Query: 181 atatattgctctgagggtgttgggggacagatagaaagttcttactaatctagaagttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatattgctctgagggtgttgggggacagatagaaagttcttactaatctagaagttac 440

                                                                       
Query: 241 ttcatcagacgcttggtttttccaaaccatgtctatagggataataggattgctctgaac 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 441 ttcatcagacgcttggtttttccaaaccatgtctacagggataataggattgctccgaac 500

                                                                       
Query: 301 aacagcagagcagttggtagtgatagagcatcactctcaggtttcccacctgaagtaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagcagagcagttggtagtgatagagcatcactctcaggtttcccacctgaagtaacc 560

                                                                       
Query: 361 gtcctttctagaaggcaccacat-----ctggagataatattttttgtagtctttttttt 415
           |||||||||||||||||||| ||     ||||||||||||||||||||||||||| ||| 
Sbjct: 561 gtcctttctagaaggcaccaaatattatctggagataatattttttgtagtctttcttt- 619

                                                                       
Query: 416 gttgttgttgttgttgttgtcttcatgttttg--aggagactctggtattgcccaaatca 473
                 ||||||||||||||||||||||||||  |||||||||||||||||||||||| |
Sbjct: 620 ------gttgttgttgttgtcttcatgttttgtgaggagactctggtattgcccaaatta 673

                                                                       
Query: 474 ttaggagaaaaagaatcttcttaacagaaagtctttggggagttatcttctaaggcctta 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttaggagaaaaagaatcttcttaacagaaagtctttggggagttatcttctaaggcctta 733

                                                                       
Query: 534 ttgttcccatgggttcagggttcttcatatgccatggcagagtgttatggtttcgaccag 593
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctgttcccatgggttcagggttcttcatatgccatggcagagtgttatggtttcgaccag 793

                                                         
Query: 594 tctggggtaggccacacatgcctaaagggctgattgctgaaaggat 639
           ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 794 tctggggtaggccacacatgcctgaagggctgattgctgaaaggat 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1044
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1034
Effective search space:   650386
Effective search space used:   650386
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)