Query= MSMg01no267_l12.b1 MSMg01no267_l12.b1 CHROMAT_FILE:
MSMg01no267_l12.b1 PHD_FILE: MSMg01no267_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:50 2005
(316 letters)
>mm_chr4_127613668_127614383
Length = 716
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctggaaacagccacacaaggctaatagctacaacattaggtaaaaggagaaag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctggaaacagccacacaaggctaatagctacaacattaggtaaaaggagaaag 263
Query: 64 tgtaaacaaggaggtagacctatgcttatatctcaaacctgccggaaagatgggaattca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtaaacaaggaggtagacctatgcttatatctcaaacctgccggaaagatgggaattca 323
Query: 124 gtggggtttctgccaatacctgggcaaatacccactgggaactgtggctcgtactttcgt 183
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 324 gtggggtttctgccaatacctgggcaaatacccactgggaactgtggttcatactttcgt 383
Query: 184 gcccccagcaagcaagggcactacccatctccttcactgctattgtcccagcttcagaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 gcccccagcaagcaagggcactacccatctccttcactgctattgtcccagcttccgaca 443
Query: 244 gtgaaatgaatacagtcaggggggccagggaggggataggaagaccagggagctctaagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgaaatgaatacagtcaggggggccagggaggggataggaagaccagggagctctaagc 503
Query: 304 atctgctaaggtg 316
|||||||||||||
Sbjct: 504 atctgctaaggtg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_l12.g1 MSMg01no267_l12.g1 CHROMAT_FILE:
MSMg01no267_l12.g1 PHD_FILE: MSMg01no267_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:51 2005
(289 letters)
>mm_chr4_127796116_127796802
Length = 687
Score = 478 bits (247), Expect = e-139
Identities = 278/289 (96%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 tgggaaatgtgagtcctgaggtgggagaatgaagtggtatttatgaggccgcaaggccag 60
||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 487 tgggaaatgtgagtcctgaggtgggagaatgaagtggtatttagggggcagcaaggccag 428
Query: 61 aggcatcttgggggagggtgctctgcgtcacactgagaaagatccaggcttcagagactg 120
||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||
Sbjct: 427 aggcatcttgggggagggtgctctgggtgacac--agaaagatccaggcttcagagactg 370
Query: 121 gcacagagaccaccactgtcacacaaggagggagtcacagactccaagccaaatgtcatt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 369 gcacagagaccaccactgtcacacaaggagggagtcacagactccaagacaaaagtcatt 310
Query: 181 catctccaggggaatatgaaataaaaagcaaaagtaatacagaagttcagaatgaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 309 tatctccaggggaatatgaaataaaaagcaaaagtaatacagaagttcagaacgaaggct 250
Query: 241 tgggaagtggcctcagttggccaagtacaaagaccaaagtttgatcccc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgggaagtggcctcagttggccaagtacaaagaccaaagtttgatcccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 687
Length adjustment: 9
Effective length of query: 280
Effective length of database: 678
Effective search space: 189840
Effective search space used: 189840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
