Query= MSMg01no267_p09.b1 MSMg01no267_p09.b1 CHROMAT_FILE:
MSMg01no267_p09.b1 PHD_FILE: MSMg01no267_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:09 2005
(317 letters)
>mm_chr4_115899784_115900500
Length = 717
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%)
Strand = Plus / Minus
Query: 4 ggaattccttatgtaaatcatgctgatcttggaacacagacactcccccttctgtctccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggaattccttatgtaaatcatgctgatcttggaacacagacactcccccttctgtctccc 255
Query: 64 aaatgctgggagtgatgcagcagcacacccagcttaatgcttttttcccacatttattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaatgctgggagtgatgcagcagcacacccagcttaatgcttttttcccacatttattta 195
Query: 124 tttatttatttacttacttacttacttatttaatgtgtgtgtccccacatgtatatgtgg 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttatttacttacttacttacttacttatttaatgtgtgtgtccccacatgtatatgtgg 135
Query: 184 gtgcacacgtgtcagagtgcccaggtagaagacagagacaacttagggaagttttctcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gtgcacacgtgtcagagtgcccaggtagaagacagagacaacttagggaagttttctcct 75
Query: 244 cctcccatgtggattctggagaatcacatgcatgttatgaggctggatactgttagcaag 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 74 cctcccatgtggattctggagaatcacatgcaggttatgaggctggatactgttagcaag 15
Query: 304 aacttttacctaa 316
|||||||||||||
Sbjct: 14 aacttttacctaa 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_p09.g1 MSMg01no267_p09.g1 CHROMAT_FILE:
MSMg01no267_p09.g1 PHD_FILE: MSMg01no267_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:09 2005
(292 letters)
>mm_chr4_115753821_115754514
Length = 694
Score = 540 bits (279), Expect = e-158
Identities = 289/293 (98%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 tcattgtggttgaagctgctcactgtatactgatctgtgtgaacataggtgagag--tat 58
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tcatcgtggttgaagctgctcactgtatactgatctgtgtgaacataggtgagagtatat 260
Query: 59 ataggacaagggagaggggtagtcctgcctggttttgcagtagtcagcctatgtgtccct 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataggacaagggagaggggtagtcctgcctggttttgcagtagtcagcctatgtgtccct 320
Query: 119 ataataaggagaagaaacattgatcagaacttcaagattatccttagctacatactgttt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataataaggagaagaaacattgatcagaacttcaagattatccttagctacatactgttt 380
Query: 179 cacggccagccttcactgcataaaactgagaccccgacttcaaaaagactcctgtgaagt 238
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 cacggccagccttcactgcataaaactgagaccctgacttcaaaaagactcctgtgaagt 440
Query: 239 aaaaaacattcaatgtcataataatatgtggaaaagtagaattttacctcgtt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaacattcaatgtcataataatatgtggaaaagtagaattttacctcgtt 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 694
Length adjustment: 9
Effective length of query: 283
Effective length of database: 685
Effective search space: 193855
Effective search space used: 193855
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
