Query= MSMg01no271_n16.b1 MSMg01no271_n16.b1 CHROMAT_FILE:
MSMg01no271_n16.b1 PHD_FILE: MSMg01no271_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:50 2005
(313 letters)
>mm_chr4_131743057_131743769
Length = 713
Score = 571 bits (295), Expect = e-167
Identities = 306/311 (98%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 5 gaattctagaagagccagagctatgtagagagactctgtctcaaaatacaataaagaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagaagagccagagctatgtagagagactctgtctcaaaatacaataaagaagt 264
Query: 65 gcatggccctaaacttacaactatagcaaccccaattggacttccatgtcccaggtactg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcatggccctaaacttacaactatagcaaccccaattggacttccatgtcccaggtactg 324
Query: 125 taaatattaacaatctcttactttcacttcaagactttaag---aacaacaacaacaaca 181
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 taaatattaacaatctcttactttcacttcaagactttaagtacaacaacaacaacaaca 384
Query: 182 acaacaacaaaagactaagtacttctgaggtttattttcttcttctgttattgttaagag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaacaacaaaagactaagtacttctgaggtttattttcttcttctgttattgttaagag 444
Query: 242 tgtcacaacccaagccgggcgtggtggcgcacgcctttaatcccagcacactccggaggc 301
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 tgtcacaacccaagccgggcatggtgacgcacgcctttaatcccagcacactccggaggc 504
Query: 302 agaggcaggca 312
|||||||||||
Sbjct: 505 agaggcaggca 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_n16.g1 MSMg01no271_n16.g1 CHROMAT_FILE:
MSMg01no271_n16.g1 PHD_FILE: MSMg01no271_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:50 2005
(257 letters)
>mm_chr4_131853878_131854534
Length = 657
Score = 375 bits (194), Expect = e-108
Identities = 235/258 (91%), Gaps = 16/258 (6%)
Strand = Plus / Minus
Query: 1 ttcctcagaaggctccctcaagggtttatctttggtccaaataactacagcaatatccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcctcagaaggctccctcaagggtttatctttggtccaaataactacagcaatatccca 249
Query: 61 gatagccctttctgtctgtttctaactacaccctgcacccagcaatgctttttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gatagccctttctgtctgtttctaactacaccctgcacccagcaatgc------------ 201
Query: 121 tttttttttttttttttgggcactaaaggcatacctgccttcacccaaaacttcctggcc 180
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 200 ---ttttttttttttttggtcactagaggcatacctgccttcacccaaaacttcctggcc 144
Query: 181 tctgactatctgcaaagacccctgctctacatggcaaac-tttttttttttttttttttt 239
|||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 143 tctgactatctgcacagacccctgctctacatgtcaatcttttttttttttttttttttt 84
Query: 240 tttgaaaaagggtttctc 257
||||| | ||||||||||
Sbjct: 83 tttgagacagggtttctc 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 121
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
