Query= MSMg01no272_e22.b1 MSMg01no272_e22.b1 CHROMAT_FILE:
MSMg01no272_e22.b1 PHD_FILE: MSMg01no272_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:26 2005
(318 letters)
>mm_chr4_92958639_92959356
Length = 718
Score = 540 bits (279), Expect = e-158
Identities = 311/337 (92%), Gaps = 24/337 (7%)
Strand = Plus / Minus
Query: 5 gaattcacggatgcacatatggggtatatctatgtaaatgcaaggttttgttctgaatga 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gaattcacggatgtacatatggggtatatctatgtaaatgcaaggttttgttctgaatga 593
Query: 65 gagagatttggtcactgatatctatatatgtgt------------------------ata 100
||||||||||||||||||||||||||||||||| |||
Sbjct: 592 gagagatttggtcactgatatctatatatgtgtatacatacatacatacatacatacata 533
Query: 101 catacatacatacatataaatgtttgtatatctaatttacatatagtatatagtagatat 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 catacatacatacatataaatgtttgtatatctaatttacatatagtatatagtagatat 473
Query: 161 attagaaaataaaaatttactaatcgatataaaattttgtcattacatctttaattcttg 220
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 472 attagaaaataaaaatttactaatcgatagaaaattttgtcattacatctttaattcttg 413
Query: 221 gtaaggtgaactgactccatttaaataaagatttaaatcaaatcttttagtcctgctgtt 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtaaggtgaactgactccatttaaataaagatttaaatcaaatcttttagtcctgctgtt 353
Query: 281 aggggtcctatgtgaagaccaagctgcaatttattta 317
|||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggggtcctatgtgaagaccaagctgcaatttattta 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_e22.g1 MSMg01no272_e22.g1 CHROMAT_FILE:
MSMg01no272_e22.g1 PHD_FILE: MSMg01no272_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:26 2005
(291 letters)
>mm_chr4_92883989_92884679
Length = 691
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 caaaacaacttgaaaaatggctattatgagcaaattttggaaaactgagaatttttctag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 caaaacaacttgaaaaatggctattatgagcaaattttggaaaaatgagaatttttctag 260
Query: 61 atcttattgggaaacacatatagaatgagaatggaacaaatatgacttcatgtggtgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 atcttattgggaaacacatatagaatgagaatggaacaaatatgacttcatgtggtgttc 320
Query: 121 actgtttctctttcagcatcaaacttgtccatgtgtattcccagtatctcactatttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgtttctctttcagcatcaaacttgtccatgtgtattcccagtatctcactatttgtt 380
Query: 181 atatcatttgacatggttagtttttgtaacttgtcagataatgtgaacagaaatcaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatcatttgacatggttagtttttgtaacttgtcagataatgtgaacagaaatcaacat 440
Query: 241 gctttcccatgagggaaaaaggtagaaaaattttaatctagcaagatat 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctttcccatgagggaaaaaggtagaaaaattttaatctagcaagatat 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
