XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACATTCAGTTCGGCTCTTCAACCCTCCCAGAATTGGAATATGGTCACCAA
AACCCTCTGTTTCCTTCCAGTTTATTCTTAAAGAGCAGTGATTTGCAGCA
TATCCTTTGTTCTTCCAGGAGTCAATATTTATTTTTAAGATCATTTGAAT
GGCTTACTACCCCATCAGTAACTGTTGATGCTAGAATGAGATATGACACT
TTGTGTTAGTGACATAATAAATACCCGAGATAATCAGCCAATAAGTAGAA
AAGATTAATTGTGGCTTACAGTTTGAGAGACCCAATTTGACAGGGCAGAT
GTTTTTAGGCATCTCTAGTGAAGGGACAGGAGCACATGGAAGAACAAATC
CAGACAACTCTTGGCTTAGCGACAAGGGTCAGAAAGAGGAAGGAGGTACG
ATAATCCATTATTCCCTGAATGCACACCCAGAGTGACTTAAAGACTTCTC
ATGAGGCCCTCCCTAATAAGGTTCTTTTCATTATATCCTACTAGTCTGAG
GACCAAACCTTTAATACATAGACTTTTGGAGGAGGGCATTCCAGGTCTAA
ATTATAGTATACATTAATTGAAAGGACATAAATTAAGAAATTGTAATGAG
AATATATGCAAGGAACTTGGGAGTAAACAAACCTTCTTTAGAAGATAAAG
AAAGATTTCTTAGGTGTGGTTGCTATTCTTGGTTGTCAGTTTGACTACAT
C

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTTATCTTTCCAAGACTTTTATCATGAATGGGTG
TTGGATCTTGTCAAATGCTTTCTCCACATCTAAGGAGATGATCATGTGGT
TTTTGTCTTTGAGTTTGTTTATATAATAGATTATGTTGATGGATTTCTGT
ATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATG
GATGATTGCTTTAATGTGTTCTTGGATTTGGTTAGCGAGAATTTTATTGA
GTATTTTTGCATTGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATC
TTTGTTGTTTTTTTCTGCCCCCCCCCATCAGAGTAATTTGTGGCTTCATA
GAATGAGCTGGGTAGAGTACCTTCTACTTCTATTTTGTGGAAAAGTTTGT
GCAGAACTGGAACTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTA
AACCCATCTGGTTGTGGGCTTTTTTTGGCTGGGAGACTATTAATGGCTGC
TTCTATTTCTTTAGGGGATATTGGCACTGTTTTAGATCATTAACTTGATC
CTGATTTCACTTTGGCACCTGTTATCTGTCTACAAATTTGATAATTTCAT
CCAGTTACTCCAGTTTTGGTAAATATATTCTTTATGAATAATGATCAGTA
AGATGATTATGGATTTTTATTTTCATATCTATGCTATCTCCCCTCTTTTC
TTTACTAN

Query= MSMg01no272_h01.b1 MSMg01no272_h01.b1 CHROMAT_FILE:
MSMg01no272_h01.b1 PHD_FILE: MSMg01no272_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:36 2005
         (711 letters)



>mm_chr4_14958438_14959548
          Length = 1111

 Score = 1338 bits (692), Expect = 0.0
 Identities = 704/708 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacattcagttcggctcttcaaccctcccagaattggaatatggtcaccaaaac 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattcacattcagtttggctcttcaaccctcccagaattggaatatggtcaccgaaac 263

                                                                       
Query: 64  cctctgtttccttccagtttattcttaaagagcagtgatttgcagcatatcctttgttct 123
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctctgttttcttccagtttattcttaaagagcagtgatttgcagcatatcctttgttct 323

                                                                       
Query: 124 tccaggagtcaatatttatttttaagatcatttgaatggcttactaccccatcagtaact 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccaggagtcaatatttatttttaagatcatttgaatggcttactaccccatcagtaact 383

                                                                       
Query: 184 gttgatgctagaatgagatatgacactttgtgttagtgacataataaatacccgagataa 243
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 gttgatgctagaatgagatatgacactttttgttagtgacataataaatacccgagataa 443

                                                                       
Query: 244 tcagccaataagtagaaaagattaattgtggcttacagtttgagagacccaatttgacag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagccaataagtagaaaagattaattgtggcttacagtttgagagacccaatttgacag 503

                                                                       
Query: 304 ggcagatgtttttaggcatctctagtgaagggacaggagcacatggaagaacaaatccag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggcagatgtttttaggcatctctagtgaagggacaggagcacatggaagaacaaatccag 563

                                                                       
Query: 364 acaactcttggcttagcgacaagggtcagaaagaggaaggaggtacgataatccattatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acaactcttggcttagcgacaagggtcagaaagaggaaggaggtacgataatccattatt 623

                                                                       
Query: 424 ccctgaatgcacacccagagtgacttaaagacttctcatgaggccctccctaataaggtt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccctgaatgcacacccagagtgacttaaagacttctcatgaggccctccctaataaggtt 683

                                                                       
Query: 484 cttttcattatatcctactagtctgaggaccaaacctttaatacatagacttttggagga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cttttcattatatcctactagtctgaggaccaaacctttaatacatagacttttggagga 743

                                                                       
Query: 544 gggcattccaggtctaaattatagtatacattaattgaaaggacataaattaagaaattg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gggcattccaggtctaaattatagtatacattaattgaaaggacataaattaagaaattg 803

                                                                       
Query: 604 taatgagaatatatgcaaggaacttgggagtaaacaaaccttctttagaagataaagaaa 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taatgagaatatatgcaaggaacttgggagtaaacaaaccttctttagaagataaagaaa 863

                                                           
Query: 664 gatttcttaggtgtggttgctattcttggttgtcagtttgactacatc 711
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gatttcttaggtgtggttgctattcttggttgtcagtttgactacatc 911


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 1111
Length adjustment: 10
Effective length of query: 701
Effective length of database: 1101
Effective search space:   771801
Effective search space used:   771801
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)