TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGAGGCTCATTCAAAGAAACATGTAACAATAAATTGCTGAAATATA
TTCAGTTTCTTTCAGTCTCAGAAACTCGCATGGCATATAGCTTTCTCCTT
AATGTATGCAAAAGGAAAAATAACACCATGATAGTTATCACTAGCGATAG
GTCCACAATATGCTGAAACGTCCACACCTAATCTTCATTTGTAGTCTACT
GACCATTATATTATTAACAGGTATGTCAAAATTGAGTGCAGAGCATAAAA
TAGATTTTTCATTTTATTTGCATTCTGAAGTTTGTACATAGTTCATTATA
TGGAAAATAAGCACCAACACTGTAATTACCTGGACCCGTATTTCAGAGGC
TGTATGTTATCTAAAGTAGGAGACTGTTCATACTGATGTGGCAATTCATT
TCTATTAATTAAAATAATATTTTTTGTTGATTTTTTTGTTTTGTTTTGAT
TTTGCCAAATCGGATGATGCCAAACTAGAGTTTGGGATGCAAAATGTCCT
ATTTGTGTCAGCTATATGATATCTTTGCCTGCAAGTTACAAAAGTAACTT
CTTGCATACCAAAGAAGATGNAGTAATGTGTTTCAATGATTTTTTTATTA
CATAAATTTGTAAAATTAGATTTAATAAATTCTACCATTAAGCTGTTTAA
TACAAAAAACAGCCAGCCATN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACACCCTTCATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCATTTTCTTTTAATTGGGTTAATTTGTTT
TTTGTTGTACATTAACCCTCTACCAGATGTAGGATTGGTAAGGGTATTTT
CCAATCTGCTGGTTGCCTTGGAGTCTAATTTTCGAGTCCTATTTATATTT
TGTACATTAACCCTCTACCAGATGTATGATTGGTAAGGGTATTTTCCAAT
CTGCTGGTTGTCTTTTGGTCTTACCCACCCCGCCCTTTACCTTACAGACA
CCTTTGTTTCATGAGATCCTATTTATCAATTACAAGATCTTAAAGTCTGA
GTCATTGGTGGAAATTTCCCTATACCAATGGATTCAAGGCCCTTTTCCAC
TCTATCTTCTATTAGATTCAGTGTATCTGATTATATGTTGAAGTCCTCGA
TCCACTTGGACTTGATACAAATTGATGCATAGTTTGCTCTTTAATTAAGC
ATTTAAAAAATTTACTGTTTGAGAATTTCAAACATGTATACAGTATAATG
AAATATAATTAATATCTGCCAACTCTCATTTTAGAATGAAAGCACAATAG
TTATACAATAGTACACT

Query= MSMg01no273_p19.b1 MSMg01no273_p19.b1 CHROMAT_FILE:
MSMg01no273_p19.b1 PHD_FILE: MSMg01no273_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:27 2005
         (567 letters)



>mm_chr4_27355745_27356710
          Length = 966

 Score =  940 bits (486), Expect = 0.0
 Identities = 547/570 (95%), Gaps = 11/570 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgaggctcattcaaagaaacatgtaacaataaattgctgaaatatattcagttt 64
           ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 607 gaattctgaggctcatttaaagaaacatttaacaataaattgctgaaatatattcagttt 548

                                                                       
Query: 65  ctttcagtctcagaaactcgcatggcatatagctttctccttaatgtatgcaaaaggaaa 124
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctttcagtctcagaaaat-gcatggcatatagctttctccttaatgtatgcaaaaggaaa 489

                                                                       
Query: 125 aataacaccatgatagttatcactagcgataggtccacaatatgctgaaacgtccacacc 184
           ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 488 aataacaccttgatagttatcactagcgataggtccacaatgtgctgaaacgtccacacc 429

                                                                       
Query: 185 taatcttcatttg-tagtctactgaccattatattattaacaggtatgtcaaaattgagt 243
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 taatcttcatttgat-gtctactgaccattatattattaacaggtatgtcaaaattgagt 370

                                                                       
Query: 244 gcagagcataaaatagatttttcattttatttgcattctgaagtttgtacatagttcatt 303
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcagagcataaactagatttttccttttatttgcattctgaagtttgtacatagttcatt 310

                                                                       
Query: 304 atatggaaaataagcaccaacactgtaattacctggacccgtatttcagaggctgtatgt 363
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 309 atatggaaaataagcaccaacactgtaattacctgaacctgtatttcagaggctgtatgt 250

                                                                       
Query: 364 tatctaaagtaggagactgttcatactgatgtggcaattcatttctattaattaaaataa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatctaaagtaggagactgttcatactgatgtggcaattcatttctattaattaaaataa 190

                                                                       
Query: 424 tattttttgttgattt-----ttttgttttgttttgattttgccaaatc-ggatgatgcc 477
           || |||||||||||||     ||||||||||||||| |||||||||||| || |||||||
Sbjct: 189 ta-tttttgttgatttttttgttttgttttgttttgtttttgccaaatctgg-tgatgcc 132

                                                                       
Query: 478 aaactagagtttgggatgcaaaatgtcctatttgtgtcagctatatgatatctttgcctg 537
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 131 aaactagagtttgggatgcaaaatgtcctatttgtgtcagctatatgatctctttgcctg 72

                                         
Query: 538 caagttacaaaagtaacttcttgcatacca 567
           |||||||||| |||||||||||||||||||
Sbjct: 71  caagttacaagagtaacttcttgcatacca 42


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space:   532492
Effective search space used:   532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)