Query= MSMg01no274_l24.b1 MSMg01no274_l24.b1 CHROMAT_FILE:
MSMg01no274_l24.b1 PHD_FILE: MSMg01no274_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:21 2005
(295 letters)
>mm_chr4_83683886_83684580
Length = 695
Score = 528 bits (273), Expect = e-154
Identities = 290/297 (97%), Gaps = 4/297 (1%)
Strand = Plus / Plus
Query: 1 atgaacttaagagccagcttttcgtatatggagtatgagattctggttccaccc--tcag 58
|||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 201 atgaacttaagagccagcttttcgtatatggagtatgagattctgg--ccacacgttcag 258
Query: 59 atagaagtttctagaaggaagctggaattggacacttcaccagaagaggagggctccaga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atagaagtttctagaaggaagctggaattggacacttcaccagaagaggagggctccaga 318
Query: 119 gctgtcacaactggaagtgctggtgttgatatgctaattacatagagccttaatgaactt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctgtcacaactggaagtgctggtgttgatatgctaattacatagagccttaatgaactt 378
Query: 179 gggtcattcctggtgtggataagatgacaaaacccattcatctgtgacaacgtctctgct 238
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 gggtcattcctggtgtggataagatgacaaaacccattcatctgtgacaatgtctctgct 438
Query: 239 ttctcccctaggccacataggctgtggcgctctctcacttaggaacttctggtgtgt 295
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 439 ttctcccctaggccacataggctgtggctctctctcacttaggaacttctggtgtgt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_l24.g1 MSMg01no274_l24.g1 CHROMAT_FILE:
MSMg01no274_l24.g1 PHD_FILE: MSMg01no274_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:21 2005
(291 letters)
>mm_chr4_83818598_83819288
Length = 691
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%)
Strand = Plus / Minus
Query: 1 cagtcttgcgcctgacaggaagtgtgatgtcttggtggtagcatgctgggtggtaacgtg 60
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 491 cagtcttgtgcctgacaggaagtgtgatgtcttggtggtagcgcgctgggtggtaacgtg 432
Query: 61 attactgtgaagaaaaagcagccagcttagttttcagtaggggagtcagctttctctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 attactgtgaagaaaaagcagccagcttagttttcagtaggggagtcagctttctctttg 372
Query: 121 catgctatctccatggtaatcgccatgaccccaaagaaaggggcccagcattgagaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 catgctatctccatggtaatcgccatgaccccaaagaaaggggcccagcattgagaggag 312
Query: 181 caggttttcctcatgcttgtcaaagcctgtcagtgctctctggtggaatgtggtacaatc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 311 caggttttcctcatgcttgtcaaagcctgtcagtgctctctggcggaatgtggtacaatc 252
Query: 241 ctcctaatgcaattaagcagagccttcatttttcttttttttttcttttcc 291
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 251 ctcctaatgcaattaagcagagccttcatttttctttttttcttcttttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
