CATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTAGATTACCATCCAGAGAACCAAATAACCCTAGTAAAAATTAG
AGTAAAGAGCTAAATATAGAACTCTTTACAGAGGCAACAGTTAAAGACAT
CCTTAATCATCAGGGAAGTGCAAAGTCAAAATGACCCTGAGATTCCACAT
TACATCAGTCAGAATAGCTAAGATCAAAAAAGCAGATAACAGCAGATACT
GGGGAGGATGTGGGGAAAGAGGTATACTCCTCCATTGCTGGTGAGACTAC
AAGCTAGTAAAACCACTTTGAAAATCAGTCTGCCGATTCTTGAGAATATT
GGAAATTGTTCTACCTGAAGACCCAGCTATACTGCTCCTGGGCATATACC
CCAAAAATCCTCCATGATATTACAAGGACACATGCTCAACTATGTTCATA
GCAGCCTTATTTATAATAGCCAGAAGCTGGAAACACCCATGTCTCCCCAA
AAGGACAAAAGGGGGAATACCATGGGGCATGGGGGTTTTTTNNTCTNCCN
NCNNCNTTCNNNNNAAAACAAGACTTCATGAAATTTGCAGGCCAAATAAC
GNTNAGAAAAAACAACCTCCCCGGGGAGAACACCCACCCCTNNTCAAAAA
GAAATNTNNNNTAAACCNCCCCGGGGTTAGAGTCACCCTACTATAAAAAA
GAGAGAGTTGGGGGGTNNTTNNNNNNNNNNNGGGGNNNNNTCCTTCCANA
AAA

CCCGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACAATAGCAAACAATAAAT
AATTAAAAATACAGAACAGTGCCACCCAACTCTTGACATAAAACAAAAGA
GAACAGTAGAGAAACTATTAAATAAAGTCAGTTTGATAATTAGTTTTGCC
CATTTAATGCCTGTGTACTTTGGATGTGTTAAGAAAAATCTTGAAGCCTG
TGATTTTGTGAATGTTTATCAAATCGGTATAGCATGCAAAACTTAATCAA
ATATTAATTAGCTGAATATAATTTTAATGTATCCACTAGAGAACACTATT
GTTAGAACTACGCCCCCCCCCAACACACACCTTCCACAAAATTTTAGAAT
ACATGGTGTCAAGCAACCAAGTGAAGAAGCAATTTAAATCATCCATACAA
AGTGACAGACAGGGAAAACTAAGTTGACAGCTAAGATCCCTAGGACTTTA
GATTCTGAACTGGAATGTATCAAGGACAACAGCACACCAAGAAAACATGC
ATTAATGATTCTCCTCTTCTTCACGTATACAGGCATTGTCTGCTTACTTT
GTCAGGCATGATGCTCAACACCAAGGAAGCAAAGCTGATGGTTAAGATAT
GGCTCCCCAGTCTCCCAACTGACCCCTCGAGTACCTAGGAACACATATGA
GGACTGCCTCAAGTCAAAGCATGAGGTTCCAGTGACTTC

Query= MSMg01no275_h17.g1 MSMg01no275_h17.g1 CHROMAT_FILE:
MSMg01no275_h17.g1 PHD_FILE: MSMg01no275_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:14 2005
         (660 letters)



>mm_chr4_66504941_66506000
          Length = 1060

 Score = 1237 bits (640), Expect = 0.0
 Identities = 655/660 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacaatagcaaacaataaataattaaaaatacagaacagtgccacccaactcttgacat 60
           |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||
Sbjct: 860 tcacaatagcaaacaataaataattaaaaatacagaacagtggcattcaactcttgacat 801

                                                                       
Query: 61  aaaacaaaagagaacagtagagaaactattaaataaagtcagtttgataattagttttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 800 aaaacaaaagagaacagtagagaaactattaaataaagtcagtttgatatttagttttgc 741

                                                                       
Query: 121 ccatttaatgcctgtgtactttggatgtgttaagaaaaatcttgaagcctgtgattttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccatttaatgcctgtgtactttggatgtgttaagaaaaatcttgaagcctgtgattttgt 681

                                                                       
Query: 181 gaatgtttatcaaatcggtatagcatgcaaaacttaatcaaatattaattagctgaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaatgtttatcaaatcggtatagcatgcaaaacttaatcaaatattaattagctgaatat 621

                                                                       
Query: 241 aattttaatgtatccactagagaacactattgttagaactacgcccccccccaacacaca 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gattttaatgtatccactagagaacactattgttagaactacgcccccccccaacacaca 561

                                                                       
Query: 301 ccttccacaaaattttagaatacatggtgtcaagcaaccaagtgaagaagcaatttaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccttccacaaaattttagaatacatggtgtcaagcaaccaagtgaagaagcaatttaaat 501

                                                                       
Query: 361 catccatacaaagtgacagacagggaaaactaagttgacagctaagatccctaggacttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catccatacaaagtgacagacagggaaaactaagttgacagctaagatccctaggacttt 441

                                                                       
Query: 421 agattctgaactggaatgtatcaaggacaacagcacaccaagaaaacatgcattaatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agattctgaactggaatgtatcaaggacaacagcacaccaagaaaacatgcattaatgat 381

                                                                       
Query: 481 tctcctcttcttcacgtatacaggcattgtctgcttactttgtcaggcatgatgctcaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcctcttcttcacgtatacaggcattgtctgcttactttgtcaggcatgatgctcaac 321

                                                                       
Query: 541 accaaggaagcaaagctgatggttaagatatggctccccagtctcccaactgacccctcg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 accaaggaagcaaagctgatggttaagatatggctccccagtctcccaactgacccctcg 261

                                                                       
Query: 601 agtacctaggaacacatatgaggactgcctcaagtcaaagcatgaggttccagtgacttc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtacctaggaacacatatgaggactgcctcaagtcaaagcatgaggttccagtgacttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)