Query= MSMg01no276_i10.b1 MSMg01no276_i10.b1 CHROMAT_FILE:
MSMg01no276_i10.b1 PHD_FILE: MSMg01no276_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:29 2005
(316 letters)
>mm_chr4_152603039_152603750
Length = 712
Score = 507 bits (262), Expect = e-148
Identities = 298/312 (95%), Gaps = 8/312 (2%)
Strand = Plus / Plus
Query: 5 gaattctgaacagagatgctacatgctacttcaggctcatcctgcccctcccc-ccccca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattctgaacagagatgctacatgctacttcaggctcatcctgcccctccccaccccc- 263
Query: 64 cacccccaatcttctgtgctgcttcacactgctctctcaatgattctccttcctataaat 123
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 cacccccaatcttgtgtgctgcttcacactgctctctcaatgattcttcttcctataaat 323
Query: 124 tagatgttcctgggattttgaaaaaaaaaaacaaaaaacacataaaataaaaacaatacc 183
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 324 tagatgttcctgggattttg----aaaaaaacaaaaaacacataaaacaaaaacaatacc 379
Query: 184 tttgaatctcaatgtctattacaacttctcaggacacttcaagtgatttgggcctcccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttgaatctcaatgtctattacaacttctcaggacacttcaagtgatttgggcctcccct 439
Query: 244 cccccctccccccagggcctgc-tgtttagttcttactttgctaacctgccaaggcttgc 302
||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 440 cccccctccacccacggcctgcat-tttagttcttactttgctaacctgccaaggcttgc 498
Query: 303 attgaacttttg 314
|||||||||||
Sbjct: 499 tttgaacttttg 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 712
Length adjustment: 9
Effective length of query: 307
Effective length of database: 703
Effective search space: 215821
Effective search space used: 215821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_i10.g1 MSMg01no276_i10.g1 CHROMAT_FILE:
MSMg01no276_i10.g1 PHD_FILE: MSMg01no276_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:29 2005
(289 letters)
>mm_chr4_152787892_152788580
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 275/281 (97%)
Strand = Plus / Minus
Query: 7 cgcctgtctctgccctcctggtgatggtggcgggttcaacctgggtcggcttcatgttct 66
|||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 487 cgcccgtctctgccctcctggtgatggtggcgggagcaatgtgggtcggcttcatgttct 428
Query: 67 ctcgcccacagaagtgacccccagagcagggcgtttgaagtcacagcgagcggaagacag 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctcgcccacagaagtgacccccagagcagggcgtttgaagtcacagcgagcggaagacag 368
Query: 127 gaaggggcggacagagttctccgtattctccttcttgtctttggtgcttctgatctctgt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaaggggcggacagagttctccgtattctccttcttgtctttggtgcttctgatctctgt 308
Query: 187 tccttgtgtggaggcctggctggctgcctgggtcttgacatgaaactgtgcgttttttct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tccttgtgtggaggcctggctggctgcctgggtcttgacatgaaactgtgcgttttttct 248
Query: 247 gtagatatctgttttacttcctgtttctctgtgagccttta 287
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 gtagatatctgttttatttcctgtttctctgtgagccttta 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
