Query= MSMg01no277_p08.b1 MSMg01no277_p08.b1 CHROMAT_FILE:
MSMg01no277_p08.b1 PHD_FILE: MSMg01no277_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:10 2005
(283 letters)
>mm_chr4_63385923_63386605
Length = 683
Score = 458 bits (237), Expect = e-133
Identities = 271/285 (95%), Gaps = 6/285 (2%)
Strand = Plus / Minus
Query: 1 catatggccaccctttggtgtacttctatttgatcatgacaaaccccct---agccctgc 57
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 482 catatggccaccctttggtgtacttctatttgatcatgacaaa---cctgagagccctgc 426
Query: 58 ccagagttcagtggatcctaatgaactccaagagtaatccattccctcaccaactctagg 117
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 425 ccagagttcagtggatcctaatgaactccaagagtaattcattccctcaccaactctagg 366
Query: 118 ggcttggccagtgcagaaaatgtcatgggattttaaagttaacatgagctgctatccaaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcttggccagtgcagaaaatgtcatgggattttaaagttaacatgagctgctatccaaa 306
Query: 178 cttatgtctcttcaagaatggagagacacaggccaggagaggtaacatatgaagcctggt 237
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cttatgtctctttaagaatggagagacacaggccaggagaggtaacatatgaagcctggt 246
Query: 238 gttgtttattatcttgatggagtattgaggctaaaagtagacttc 282
||| | || |||||||||||||||||||||||||||||||||
Sbjct: 245 attgggcagtagcttgatggagtattgaggctaaaagtagacttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_p08.g1 MSMg01no277_p08.g1 CHROMAT_FILE:
MSMg01no277_p08.g1 PHD_FILE: MSMg01no277_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:10 2005
(290 letters)
>mm_chr4_63230439_63231128
Length = 690
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%)
Strand = Plus / Plus
Query: 1 gatggtagcctaacaagtcattagagctgtgggacatttcccatcatgagattcctagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatggtagcctaacaagtcattagagctgtgggacatttcccatcatgagattcctagca 260
Query: 61 gagttcccatttcttgggagtccgtagtttcagcagcctgagagacacgagtgtctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagttcccatttcttgggagtccgtagtttcagcagcctgagagacacgagtgtctcttt 320
Query: 121 agaatatcctcatttctgccaggccagttacaacctgttgtcaagattcacccaataagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatatcctcatttctgccaggccagttacaacctgttgtcaagattcacccaataagt 380
Query: 181 attgaataggagccatcccagggtcggcatggtttcctccaggcccctgggaggctgttt 240
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 381 attgaataggagccatcccaggatcagcatggtttcctccaggcccctgggaggctgttt 440
Query: 241 gacccccagggtggcagggatatctgacagggtgcccctgagtggagctg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacccccagggtggcagggatatctgacagggtgcccctgagtggagctg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
