Query= MSMg01no277_p22.b1 MSMg01no277_p22.b1 CHROMAT_FILE:
MSMg01no277_p22.b1 PHD_FILE: MSMg01no277_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:13 2005
(236 letters)
>mm_chr4_101965204_101965839
Length = 636
Score = 379 bits (196), Expect = e-110
Identities = 228/248 (91%), Gaps = 16/248 (6%)
Strand = Plus / Minus
Query: 1 gaactcaactaaatgtatactagaagaaaaaaagagtaaaacgatgccacatgcagg--- 57
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 529 gaactcaactaaatgtatactagaagaaaaaaagagtaaaacaatgccacatgcagggtg 470
Query: 58 -----------gtgtgtgtgtgtgtgtgtgtgtgtacacatcaaactaccttgctttgtg 106
|||||||||||||||||||||||| |||||||||||||||| | ||||
Sbjct: 469 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--acatcaaactaccttgatctgtg 412
Query: 107 gccttctcatttcatggctggttatgtgcaacagtcttccttgtgatcttgatttaagcc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gccttctcatttcatggctggttatgtgcaacagtcttccttgtgatcttgatttaagcc 352
Query: 167 cactgcagtccttaccagcccacagccaccaccctcaagaccttccgcactcactctcca 226
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 351 cactgcagtccttaccagcccacagccaccaccctcaagaccttacgcactcactctcca 292
Query: 227 ctcaggaa 234
||||||||
Sbjct: 291 ctcaggaa 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_p22.g1 MSMg01no277_p22.g1 CHROMAT_FILE:
MSMg01no277_p22.g1 PHD_FILE: MSMg01no277_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:13 2005
(131 letters)
>mm_chr4_101808476_101809006
Length = 531
Score = 246 bits (127), Expect = 5e-70
Identities = 130/131 (99%)
Strand = Plus / Plus
Query: 1 taaggaatagagggttagtagactttcaaaccccccaaggatgggtctatgatacaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaggaatagagggttagtagactttcaaaccccccaaggatgggtctatgatacaatca 260
Query: 61 tctctgggataaaatttcaggctcatctgagatggcatggagggactcactacatggtag 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctgggataaaattttaggctcatctgagatggcatggagggactcactacatggtag 320
Query: 121 agaatttccat 131
|||||||||||
Sbjct: 321 agaatttccat 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 531
Length adjustment: 8
Effective length of query: 123
Effective length of database: 523
Effective search space: 64329
Effective search space used: 64329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
