Query= MSMg01no279_a10.b1 MSMg01no279_a10.b1 CHROMAT_FILE:
MSMg01no279_a10.b1 PHD_FILE: MSMg01no279_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:31 2005
(693 letters)
>mm_chr4_104759590_104760682
Length = 1093
Score = 1313 bits (679), Expect = 0.0
Identities = 688/691 (99%), Gaps = 1/691 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacatgcacataacccacacaaagacacacacata-taaatgattaaaaatgaa 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 203 ggaattcacatgcacataacccacacaaagacacacacataataaatgattaaaaatgaa 262
Query: 63 ctcaacctttaaaagaccttttagagatggctttaaaattagtatactatgaagtttaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctcaacctttaaaagaccttttagagatggctttaaaattagtatactatgaagtttaac 322
Query: 123 acagtagtgatatcataaacataagtggataagacataaaataccctgccattgaaatgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acagtagtgatatcataaacataagtggataagacataaaataccctgccattgaaatgt 382
Query: 183 tatggtagtgccatggaatcacacttgaattcaaaattgtcatagacagcttcataaatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatggtagtgccatggaatcacacttgaattcaaaattgtcatagacagcttcataaatg 442
Query: 243 gaagcaaatgtggtactttggaaaaccacagtagagggatccaaacagtagtcctggaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaagcaaatgtggtactttggaaaaccacagtagagggatccaaacagtagtcctggaac 502
Query: 303 cacaaaacgaatgtttataacaacaacacatcatattctgacagcaaaggtagtggtaag 362
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 503 cacaaaacgaatgttaataacaacaacaaatcatattctgacagcaaaggtagtggtaag 562
Query: 363 aattttctagcaataagtgctcatataatataaaaaaagatttaaagtacacagcctaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aattttctagcaataagtgctcatataatataaaaaaagatttaaagtacacagcctaat 622
Query: 423 cagttatcttaagacccaggaaaggaagaacaaaccaaacggaaaaggagaaagaacaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cagttatcttaagacccaggaaaggaagaacaaaccaaacggaaaaggagaaagaacaaa 682
Query: 483 agtcaaagtagaaataaacataatagaacaaatacaaaagataaacaaaacggaagtttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agtcaaagtagaaataaacataatagaacaaatacaaaagataaacaaaacggaagtttt 742
Query: 543 gtcttttcaattttttaattttatatactttattacggaaaataacgaataaataacatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtcttttcaattttttaattttatatactttattacggaaaataacgaataaataacatt 802
Query: 603 ggttttataaaaagataagtaaattcaatacacctccagttagacactatcaaaaatgag 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ggttttataaaaagataagtaaattcaatacacctccagttagacactatcaaaaatgag 862
Query: 663 aagattcaaataaaattagaggtgaaaaaaa 693
|||||||||||||||||||||||||||||||
Sbjct: 863 aagattcaaataaaattagaggtgaaaaaaa 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_a10.g1 MSMg01no279_a10.g1 CHROMAT_FILE:
MSMg01no279_a10.g1 PHD_FILE: MSMg01no279_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:31 2005
(281 letters)
>mm_chr4_104899779_104900459
Length = 681
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Minus
Query: 1 gacagagatgtgggtgtggacttcggagaagcattggctttcttctagttcggtttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gacagagatgtgggtgtggacttcggagaagcattggctttcttctagttcggtttcaac 420
Query: 61 cccatcaacctcagcaccggttatcatgagaactcttaaaattggcatgattctgttggg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cccatcaacatcagcaccggttatcatgagaactcttaaaattggcatgattctgttggg 360
Query: 121 ctccagccttctaatatcttggcttcccaaggtattgttttagggaagtgattctgacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctccagccttctaatatcttggcttcccaaggtattgttttagggaagtgattctgacct 300
Query: 181 actgctaagttccaatgtttggccattctgtgatcggatgcaagggcggaagatggttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 actgctaagttccaatgtttggccattctgtgatcggatgcaagggcggaagatggttta 240
Query: 241 cttacacaaacaccctggacaatatcacccttcctccag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cttacacaaacaccctggacaatatcacccttcctccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|