Query= MSMg01no279_c19.b1 MSMg01no279_c19.b1 CHROMAT_FILE:
MSMg01no279_c19.b1 PHD_FILE: MSMg01no279_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(694 letters)
>mm_chr4_72140903_72141990
Length = 1088
Score = 1259 bits (651), Expect = 0.0
Identities = 679/691 (98%), Gaps = 6/691 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactgcttactctgaggcaggaaaaatgctaattcaaggtcagcctaggctata 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactgcatagtctgaggcaggaaaaatgctaattcaaggtcagcctaggctata 263
Query: 64 tagtaacatcttgctgagagaaatggggtgagaatatgtcatgaaaattaatttataaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagtaacatcttgctgagagaaatggggtgagaatatgtcatgaaaattaatttataaaa 323
Query: 124 tgttaattaaaatgtactatgtttccttccatctgtgtttttcagtgataaggtactaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttaattaaaatgtactatgtttccttccatctgtgtttttcagtgataaggtactaaa 383
Query: 184 atggagcttgtgttttaatttcatttatgctttcagtaaaagaaacttgcccaaatattt 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 atggagcttgtgttttaatttcatttatgctttcagtaaaagaaatttgcccaaatattt 443
Query: 244 aaattttttctaactcaagtttagaaacttgacctcaatgtagagaatggacttttctcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaattttttctaactcaagtttagaaacttgacctcaatgtagagaatggacttttctcc 503
Query: 304 tgaaccccatgtcttatcgcaacagagacttatttattatcatatacattattgaataga 363
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaactccatgtcttatcgcaacagagacttatttattatcatatacattattgaataga 563
Query: 364 aagtttaactgagtattctttcattggttttagaaataccagccattccctgatgaatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagtttaactgagtattctttcattggttttagaaataccagccattccctgatgaatga 623
Query: 424 agttagagcacaatttactccagagctatgtctctcatccttatcaggtttttaaaaaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agttagagcacaatttactccagagctatgtctctcatccttatcaggtttttaaaaaca 683
Query: 484 cttcatagctgattataaaaacactgcaacacctaatagacattgaatgtgcactaaaac 543
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 684 cttcatagctgattataaaaacactgcagcacctaatagacattgaatgtgcactaaaac 743
Query: 544 atattatttagctttcacttccataatggaatgaagaggcttcaaacagttattcttagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atattatttagctttcacttccataatggaatgaagaggcttcaaacagttattcttagg 803
Query: 604 aaagataaaaggggttggatagactttaagtcaccacagggaaggctttccagggtgcaa 663
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 804 aaagataaaaggggttggatagactt-aagtcaccacagggaaggctttccagggtgcaa 862
Query: 664 ctcaatgtttgtattaggctgtttctgaggt 694
|||| |||||||||| |||||||||||
Sbjct: 863 ctca-----tgtattaggcggtttctgaggt 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1088
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1078
Effective search space: 737352
Effective search space used: 737352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_c19.g1 MSMg01no279_c19.g1 CHROMAT_FILE:
MSMg01no279_c19.g1 PHD_FILE: MSMg01no279_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(204 letters)
>mm_chr4_72237948_72238551
Length = 604
Score = 395 bits (204), Expect = e-114
Identities = 204/204 (100%)
Strand = Plus / Minus
Query: 1 aaagactcttagtgtcttaatgaccacaaacacataaccaaccatgaagatgaattacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaagactcttagtgtcttaatgaccacaaacacataaccaaccatgaagatgaattacac 345
Query: 61 atatcttgtgttgtatgtacttgcttggtctgtaagaactcacatttcttcagtgtttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atatcttgtgttgtatgtacttgcttggtctgtaagaactcacatttcttcagtgtttaa 285
Query: 121 actattgttgtgccaataattttattcagtattagaagtgacactatcaacatagaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 actattgttgtgccaataattttattcagtattagaagtgacactatcaacatagaacat 225
Query: 181 aatgcatagacttccaagaaggaa 204
||||||||||||||||||||||||
Sbjct: 224 aatgcatagacttccaagaaggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
