Query= MSMg01no288_l18.b1 MSMg01no288_l18.b1 CHROMAT_FILE:
MSMg01no288_l18.b1 PHD_FILE: MSMg01no288_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(306 letters)
>mm_chr4_69680744_69681447
Length = 704
Score = 507 bits (262), Expect = e-148
Identities = 293/304 (96%), Gaps = 2/304 (0%)
Strand = Plus / Minus
Query: 3 tggctttggctactttccaaggaaatgtggaagagaattttgaagacttctaggtcatca 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 504 tggctttggctactctccaaggaaatgtggaagagaattttgaagacttctaggtcacct 445
Query: 63 gccacgggcatcaactgatttcaaaacaaagggggaggaggggttagaagttcaatagac 122
||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 gccacaggcgtcaactgatttcaaaacaaagggggaggaggggttaggagttcaatagac 385
Query: 123 atgggcttaaatcatgtttcatctttttctgagctgaatttccccaggagtaacatttgt 182
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgggcttaaaccatgtttcatctttttctgagctgaatttccccaggagtaacatttgt 325
Query: 183 aagaactaacactcactaagggtttttcacagaccacaggatattctaattttaaaaatg 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagaactaacactcactaagagtttttcacagaccacaggatattctaattttaaaaatg 265
Query: 243 gcttaatgcattgtttgcaaactgactgtcctggggtggggaccatgagagcatgctcta 302
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 264 gcttaatgcattgtttgcaaactgactgtcctggggtggggaccat--gagcatgctata 207
Query: 303 tgca 306
||||
Sbjct: 206 tgca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 704
Length adjustment: 9
Effective length of query: 297
Effective length of database: 695
Effective search space: 206415
Effective search space used: 206415
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_l18.g1 MSMg01no288_l18.g1 CHROMAT_FILE:
MSMg01no288_l18.g1 PHD_FILE: MSMg01no288_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(103 letters)
>mm_chr4_69495437_69495936
Length = 500
Score = 157 bits (81), Expect = 2e-43
Identities = 95/101 (94%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 1 tagggcaggaagttggaagtgggagggaggaaagaagggtgggg-aacatcctcatagaa 59
||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 201 tagggcagggagttggaagtgggagggagg---ga-gggtgggggaacatcctcatagaa 256
Query: 60 gcagggaaggggggatggtataagttttgggggtgggggaa 100
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcagggaaggggggatggtataagttttgggggtgggggaa 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 500
Length adjustment: 8
Effective length of query: 95
Effective length of database: 492
Effective search space: 46740
Effective search space used: 46740
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
