TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGATCCGCG
GAATTCCTTTTTCATTTACGGATCTCATCAAAAGAGCATCCCTGGTGCTC
AGACACTCTCAAGCTCCTTCTTGAACCCACAGGCTGAGATGGTCCCTGAT
AGTCAGTTTCTCCATCCCTGATCACTCTAAAGAAGGTTCAGAAAACAGAT
ACTTGACCATTATCAACCCTTAAAATTTAAGGGTCAAGAGTCACAGCGGT
GAAACTGAGGCAGCCTAGAAAGATAGGGAGATTTGGGTGGACACCCGGGG
ATGCAGTTTGTTTCCTGTTTACTGAGAGTCAATCGTCTTCAATTGATAAA
GCAGAAGTTGCTTGCAAAGGCAGCTCTCAATCTTCCTTTCCCTGAAGATG
TCTCTCTCAGACAAGGATGCTCACAACAACGATATTTAAGTAGGACCAGA
ACATTTATGGCCCTGAGTTTAACTGTGTTAGGACACCTCTCCGAAACGAT
GCCCCTCAAAGGAATACATTTATAGGTTCATTTAACAAAAGGAATTATTT
TAAGATTAAGGGGAAACAGGTTAAACCATTCCCATATATTTTGCTGCTTT
AATTTTTAAGCCTTTAACCAAATTTTATAAGGTAAGGTATAATACTTTAT
AAGGTTTGGTTCCAAAGTTAATATCTTTTTTGAAACCCTGGGAATTTTTA
CCCAAATCCCCCCTGGGTGCACCCCGGCATAACTCCT

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAACCAAATGGCTGA
GAAGCACCTGAAAAAATGTTCAGCACCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAAC
ACTTCTCCATTGATGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAAT
CAGTCTCACAGTTCCTCAGAAAATTGGACATAGTACTACCAGAAGATCCA
AGAATACCTGTCCTGGGCATATATTCAGAAGATGTTCCAACTGGTAATAA
GGACACATGCTCCTCTATGCCCACACCAGCCTTAATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGGATTCAGAAGA
TGTAGTACATTTACACAATGGAGTACGGCTCTGCTATTAAAAGAATGAAT
TTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGTATCATCCTGACG
GAAGTAACCGGTCGCAAAAAAAACTCACATGAAACGTACTCACTGATAAG
TTGATATTAACCCAGAAAGTTAGAATACCCAAGTTACAAGTTGCAAAACA
CATGAAACTCAAGTAAGAATGAAGACCAAAGT

Query= MSMg01no289_d03.b1 MSMg01no289_d03.b1 CHROMAT_FILE:
MSMg01no289_d03.b1 PHD_FILE: MSMg01no289_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:27 2005
         (467 letters)



>mm_chr4_8381961_8382823
          Length = 863

 Score =  783 bits (405), Expect = 0.0
 Identities = 446/461 (96%), Gaps = 4/461 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattcctttttcatttacggatctcatcaaaagagcatccctggtgctcagacactctc 66
           |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||
Sbjct: 663 gaattcctttttcatttatggttctcatcaaaagagcatccctggtgctcagatactctc 604

                                                                       
Query: 67  aagctccttcttgaacccacaggctgagatggtccctgatagtcagtttctccatccctg 126
           ||||||||||||||||  |||||||||||||||||||||   ||||||||||||||||||
Sbjct: 603 aagctccttcttgaacagacaggctgagatggtccctga---tcagtttctccatccctg 547

                                                                       
Query: 127 atcactctaaagaaggttcagaaaacagatacttgaccattatcaacccttaaaatttaa 186
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atcactctagagaaggttcagaaaacagatacttgaccattatcaacccttaaaatttaa 487

                                                                       
Query: 187 gggtcaagagtcacagcggtgaaactgaggcagcctagaaagatagggagatttgggtgg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 486 gggtcaagagtcacagcggtgaaactgaggcagcctagaaagatagggagacttgggtgg 427

                                                                       
Query: 247 acacccggggatgcagtttgtttcctgtttactgagagtcaatcgtcttcaattgataaa 306
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 acacctggggatgcagtttgtttcctgtttactgagagtcaatcgtcttcaattgataaa 367

                                                                       
Query: 307 gcagaagttgcttgcaaaggcagctctcaatcttcctttccctgaagatgtctctctcag 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcagaagttgcttgcaaaggcagctctcaatcttcctttccctgaagatgtctctctcag 307

                                                                       
Query: 367 acaaggatgctcacaacaacgatatttaagtaggaccagaacatttatggccctgagttt 426
           ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 306 acaaggatgttcaaaacaacgatatttaagtaggaccaga-catttatggccctgagttt 248

                                                    
Query: 427 aactgtgttaggacacctctccgaaacgatgcccctcaaag 467
           ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 247 aactgtgttaggacacctccccgaaacgatgcccctcaaag 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 863
Length adjustment: 10
Effective length of query: 457
Effective length of database: 853
Effective search space:   389821
Effective search space used:   389821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)