Query= MSMg01no289_k24.b1 MSMg01no289_k24.b1 CHROMAT_FILE:
MSMg01no289_k24.b1 PHD_FILE: MSMg01no289_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:03 2005
(326 letters)
>mm_chr4_63414451_63415175
Length = 725
Score = 598 bits (309), Expect = e-175
Identities = 318/321 (99%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 5 gaattccatggtctaagtagtttgtaagtgtgttggtcattgtcatgggtgttgggaagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatggtctaagtagtttgtaagtgtgttggtcattgtcatgggtgttgggaagc 264
Query: 65 ccaagaccaaggaaacaccagatttgatccctgataagggttcactccctccttcaaaga 124
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 ccaagaccaaggaaacagcagatttgatccctggtaagggttcactccctccttcaaaga 324
Query: 125 tgcaatcatgctgcatcctcaaaaaaaaaaaaatcagccttatcagttatagaagggaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcaatcatgctgcatcctcaaaaaaaaaaaaatcagccttatcagttatagaagggaat 384
Query: 185 cctctctaagggtactgatcctatccacaagggtagagatttgggtggcctcttcatagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctctctaagggtactgatcctatccacaagggtagagatttgggtggcctcttcatagt 444
Query: 245 aatgtgtttaaaatggctttttttttctgtgctaattttctgagggaggactcaggttac 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgtgtttaaaatggctttttttt-ctgtgctaattttctgagggaggactcaggttac 503
Query: 305 tccatgatgcagattcctctg 325
|||||||||||||||||||||
Sbjct: 504 tccatgatgcagattcctctg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 725
Length adjustment: 9
Effective length of query: 317
Effective length of database: 716
Effective search space: 226972
Effective search space used: 226972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_k24.g1 MSMg01no289_k24.g1 CHROMAT_FILE:
MSMg01no289_k24.g1 PHD_FILE: MSMg01no289_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:03 2005
(293 letters)
>mm_chr4_63569731_63570423
Length = 693
Score = 520 bits (269), Expect = e-152
Identities = 287/293 (97%)
Strand = Plus / Minus
Query: 1 cagacatgcttgatgtacttagcaaatttgtattgaaagtgattgcctatgccgaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 493 cagacatgcttgatgtacttagcaaatttgtattgaaagtgattgcctatgaagaaactg 434
Query: 61 ccaagcctctagaagatgtaaccttccagagtttgttccaccataagcatctgcaatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccaagcctctagaagatgtaaccttccagagtttgttccaccataagcatctgcaatgga 374
Query: 121 ctcacatcaaattagaatagccagggactgatcttaaaagttggtaagatttgcttcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctcacatcaaattagaatagccagggactgatcttaaaagttggtaagatttgcttcact 314
Query: 181 gctgaaaaaattctgggacagagaaattagcatgaaaaacatgttatgggggagatccta 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 313 gctgaaaaaattctgggacagagaaattagcatgaaaaacatgttctgggggagatccga 254
Query: 241 atatgagcatttccagaggggagggactcaagcctgagcaacagaagagattg 293
||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 253 atatgagtatttccagagaggagggactcaagcctgagcaacagaagagattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
