Query= MSMg01no290_g07.b1 MSMg01no290_g07.b1 CHROMAT_FILE:
MSMg01no290_g07.b1 PHD_FILE: MSMg01no290_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:56 2005
(117 letters)
>mm_chr4_124408919_124409438
Length = 520
Score = 153 bits (79), Expect = 4e-42
Identities = 96/103 (93%), Gaps = 3/103 (2%)
Strand = Plus / Minus
Query: 15 gaggcaaggcagccgggcagggaagggcggaccaaacacatcagtgtgaaatggt---ca 71
|||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct: 317 gaggcaaggcagcctggcagggaagggctgaccaaacacagcagtgtgaaatggtcccca 258
Query: 72 agcctgggtttctgaccacaggccactgcaggaatcaacaggg 114
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 257 agcctgggtttctgaccacaggccactgcaggagtcaacaggg 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 520
Length adjustment: 8
Effective length of query: 109
Effective length of database: 512
Effective search space: 55808
Effective search space used: 55808
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_g07.g1 MSMg01no290_g07.g1 CHROMAT_FILE:
MSMg01no290_g07.g1 PHD_FILE: MSMg01no290_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:56 2005
(287 letters)
>mm_chr4_124228885_124229571
Length = 687
Score = 497 bits (257), Expect = e-145
Identities = 278/285 (97%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 1 aaagacagcagggtgagaccccatcacaaagaaacaaaatagacaacaccaa-ggaatta 59
|||||||||||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 201 aaagacagcagggtgagaccccatcacaaagaaacaaaatagacaa-acaaaaggaatta 259
Query: 60 aaagccaagcgttctgacctcagagttcatccaagtcttgagtcgggttggaggctggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagccaagcgttctgacctcagagttcatccaagtcttgagtcgggttggaggctggga 319
Query: 120 tgggaacccagggaaatggaacgtttgcctcttttagttgaacttattttctaagagact 179
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 tgggaacccagggaaatggaacgtttgccgcttttagttgaacttattttctaagagact 379
Query: 180 gatctcataaaatggtctcagactgggattaaaatggcagggaaaagagccatctatgac 239
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 gatctcgtaaaatggtctcagactggggttaaaatggcagggaaaagagccatctatgac 439
Query: 240 taggatattcctgggtgcttagagagctcaccttttgattaatac 284
||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taggagattcctgggtgcttagagagctcaccttttgattaatac 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
