Query= MSMg01no290_l14.b1 MSMg01no290_l14.b1 CHROMAT_FILE:
MSMg01no290_l14.b1 PHD_FILE: MSMg01no290_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:21 2005
(318 letters)
>mm_chr4_58958810_58959527
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 5 gaattcacccaaatcctcatctctccaggcagaaccctcaggaactgctcaaacactaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattcacccaaatcctcatctctccaggcagaaccctcaggaactgctcaaacactaac 459
Query: 65 agctctaagatctgctctttggtgtgaatgtctggtctcagccactgcttgcagagttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agctctaagatctgctctttggtgtgaatgtctggtctcagccactgcttgcagagttcc 399
Query: 125 cagagttgattcagggtttttctgggtccttcttcctgcgagtaacaaaaccacctgaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cagagttgattcagggtttttctgggtccttcttcctgcgagtaacaaaaccacctgaac 339
Query: 185 ttctgcctgaaagagtccaggtcatcagtatttcctcttaacatactctcctggaccctc 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttctgcctgaaagactccaggtcatcagtatttcctcttaacatactctcctggaccctc 279
Query: 245 agagtatccactctggggaccctgctctgttcactcaaagccaaagctgaggggcctgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agagtatccactctggggaccctgctctgttcactcaaagccaaagctgaggggcctgtc 219
Query: 305 gtcatgtctgaggg 318
||||||||||||||
Sbjct: 218 gtcatgtctgaggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_l14.g1 MSMg01no290_l14.g1 CHROMAT_FILE:
MSMg01no290_l14.g1 PHD_FILE: MSMg01no290_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:21 2005
(290 letters)
>mm_chr4_58792543_58793234
Length = 692
Score = 545 bits (282), Expect = e-160
Identities = 289/292 (98%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 cctgtgccagtaaatgtgccagtaaccttctgttctacaaaccaggaaactagaaattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtgccagtaaatgtgccagtaaccttctgttctacaaaccaggaaactagaaattct 260
Query: 61 ttgataccttcacttactacctctgtcttatacacattaattcttatgatattaatatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgataccttcacttactacctctgtcttatacacattaattcttatgatattaatatta 320
Query: 121 tttttcaaatagcttttaaatccatctactatctttttttt--catagccaccacaatat 178
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tttttcaaatagctttcaaatccatctactatcttttttttttcatagccaccacaatat 380
Query: 179 ttcaaattcccagcaacactaagtagctcattataaatctgccctacatgcttttacttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaattcccagcaacactaagtagctcattataaatctgccctacatgcttttacttt 440
Query: 239 gtgtcaagtcccaatttccttgaattcattctctatgttgtaaccagaagaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtcaagtcccaatttccttgaattcattctctatgttgtaaccagaagaa 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 692
Length adjustment: 9
Effective length of query: 281
Effective length of database: 683
Effective search space: 191923
Effective search space used: 191923
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
