Query= MSMg01no291_k18.b1 MSMg01no291_k18.b1 CHROMAT_FILE:
MSMg01no291_k18.b1 PHD_FILE: MSMg01no291_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:31 2005
(312 letters)
>mm_chr4_46723609_46724322
Length = 714
Score = 549 bits (284), Expect = e-161
Identities = 303/310 (97%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccatgaagctcagctcagcctgtatgtgaataatgtgaaagtggccgcagccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattcaccatgaagctcagctcagcctgtatgtgaataatgtgaaagtggccgcagccc 455
Query: 65 tagccaaaggcttcattttcccttccctc--tgctgggccacagtccatgcatccatctg 122
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 454 tagccaaaggcttcatttttccttccctctgtgctgggccacagtccatgcatccatctg 395
Query: 123 acattccaaagtagtttcgatatggagagacacaggggaagcactcagcgttgctaagtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acattccaaagtagtttcgatatggagagacacaggggaagcactcagcgttgctaagtg 335
Query: 183 taaatggtcagacaagccacagagggccactgttgccgcacccgggggccaccacgcaat 242
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 334 taaatggtcagacaagccacagagggccactgttgcagcacccaggggccaccacgcaat 275
Query: 243 gtcccccatttgcttcccaggcaggttgcaatgaatgccatctcacatactgcgggcatc 302
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 274 gtcccccatttgcttcccaggcaggttgcaatgaaagccatctcacatactgcggccatc 215
Query: 303 tatgggagct 312
||||||||||
Sbjct: 214 tatgggagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 714
Length adjustment: 9
Effective length of query: 303
Effective length of database: 705
Effective search space: 213615
Effective search space used: 213615
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_k18.g1 MSMg01no291_k18.g1 CHROMAT_FILE:
MSMg01no291_k18.g1 PHD_FILE: MSMg01no291_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:31 2005
(283 letters)
>mm_chr4_46546120_46546802
Length = 683
Score = 319 bits (165), Expect = 1e-91
Identities = 174/179 (97%), Gaps = 5/179 (2%)
Strand = Plus / Plus
Query: 1 ttttccagcagaagtgcctggggctctgccggtgagtagtttgccccc---gtcaagtga 57
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18 ttttccagcagaagtgcctggggctctgccggtgagtagtttgccc--aaagtcaagtga 75
Query: 58 taagatgcagggtgagcagagcctctggccctctgcaccgcaggcctttgtcagggatgc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 taagatgcagggtgagcagagcctctggccctctgcaccgcaggcctttgtcagggatgc 135
Query: 118 cacagcctggatgcctggctcctatttctgtttgtctgcttttagaagttgctttttct 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 cacagcctggatgcctggctcctatttctgtttgtctgcttttagaagttgctttttct 194
Score = 226 bits (117), Expect = 9e-64
Identities = 120/121 (99%)
Strand = Plus / Plus
Query: 162 gaagttgctttttctaatacctggtttgggtctcttccctcgaaggggtagctatttcca 221
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 362 gaagttgctttttctaatacctggtttgggtctcttccctccaaggggtagctatttcca 421
Query: 222 ccttagccttctctacagctggtcttccacttggcacctgggcctaactcttgagaacag 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccttagccttctctacagctggtcttccacttggcacctgggcctaactcttgagaacag 481
Query: 282 g 282
|
Sbjct: 482 g 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
