TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTAACAAATTGCCCTCAAATGATCAAGAAGAACTTAAAGAAATGTT
CTTCAACATCCTTGTCATCATGTAACCGCAAATTAAGACAACTCTGACAT
TCCACTTTATACAAATCAAAATGGCTAAGATCAAAAAGTTGGATGACAGC
AGACGTTGGCAAGTCTATCGAGACAGTGAGAAACACTCCTCCTTTGCTGG
TGGGATTGCAATCTGGTACAACCACTCTGGAAATCAATATGGTGGTTCCT
CAGAAAATTGGAAATAGTTCTACCTGAAGACCTGGCTATACTGCTCCTGG
GCATATACCCAAAAGATGCTTCACTATATCACAAGGGTGTTCATAGCAGC
TTTGTTCATAATAGCTAGAAACTGGAAGCAACTGGATATCCCTTAACTGA
AGAATGGATACAAAATTTGTGGTTCATTTACATGATAGGATACTATTCAG
CAATTAAAAACAAAGACATCATGAATTTTGCAGACAAATGGATGGAACTA
TAAAATATCATGAGTAAGGTATCCCAGACCCAAAAGAACATGTATGGTAT
GTTCTCACTGATAAGTGGATGTTAGCCAAAAAGTACAGAATACCTAAGAT
ACATCCCACAGACCCAAAGAAGTGAAACAAGAAGGAAGGCCCAAGTGAGG
ATGCTTGTTCCCACTTAGAAGGGGAAACAAAATAATTATGGGAGG

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTAGGATATAGAGCAGTAGAGTTTGA
AGCCATCCTGGTTGTATGAACACTGCCTCAAAACCTTCAAATTTATTTAA
TTAATTATTTTAAAACAGTTTGAAATTAAAAGGTGTTACTCTTCATCAGG
TTGATTAAATAAGTTGAGAAAAGAAACCGGCTGGATAGAGTATCCTTTGC
CTATAATTATAACATTTAGAAGATGAGGCAGGGGGATTGCTTCAAGTATG
AGACCAGTCTTCTCTACATGGTGAAGTCACAGGACATCCAGATCCCATAT
ACAAAAGGACAAACAATGTTATATGGCATGATATTAGGTAACGTGGTAAC
ATCCTGCTCTTTAAAATCAGCTTGCAGCGTCCAAACAATAATTTTAGTGA
CCCTCAACGTGCCCCATGAACCAACACTGTTGAAGCTTCCCTGACTTGAG
ATCACTGCTCTGTAATGAAGTAATGATTCAGCACAGATGTAGCAACAATA
AAATGATAAAGTTTCTTCATAACTTTTTCATATTGCCTGGATGGTAGCTT
CACCAGAGTAATTAGTTCAAAATAACATAGGGAAAGATAGTTAGAAATGT
TCACACAGCCTAGATTCTGAAGATATAACCATTTAAAGCCAGTGAGCTTT
AAGTTACTTTTGAAATATTTAGGTTATATTTTCATTATTTTATTAAT

Query= MSMg01no293_l23.g1 MSMg01no293_l23.g1 CHROMAT_FILE:
MSMg01no293_l23.g1 PHD_FILE: MSMg01no293_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:15 2005
         (672 letters)



>mm_chr4_85313821_85314892
          Length = 1072

 Score = 1207 bits (624), Expect = 0.0
 Identities = 660/672 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   taggatatagagcagtagagtttgaagccatcctggttgtatgaacactgcctcaaaacc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 taggatatagagcagtagagtttgaagccatcctggttgtatgaacactgtctcaaaacc 260

                                                                       
Query: 61  ttcaaatttatttaattaattattttaaaacagtttgaaattaaaaggtgttactcttca 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaatttatttaattaattattttaaagcagtttgaaattaaaaggtgttactcttca 320

                                                                       
Query: 121 tcaggttgattaaataagttgagaaaagaaaccggctggatagagtatcctttgcctata 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 tcaggttgattaaataagttgagaaaagaaaccggctggatagggtatcctttgcctata 380

                                                                       
Query: 181 attataacatttagaagatgaggcagggggattgcttcaagtatgagaccagtcttctct 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgtaacatttagaagatgaggcagggggattgcttcaagtatgagaccagtcttctct 440

                                                                       
Query: 241 acatggtgaagtcacaggacatccagatcccatatacaaaaggacaaacaatgttatatg 300
           |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 441 acatggtgaagtcacaggacattcagatcccatatacaaaacgacaaacaatgttatatg 500

                                                                       
Query: 301 gcatgatattaggtaacgtggtaacatcctgctctttaaaatcagcttgcagcgtccaaa 360
           ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 501 gcatgatattaggtaacatggtgacatcctgctctttaaaatcagcttgcagagtccaaa 560

                                                                       
Query: 361 caataattttagtgaccctcaacgtgccccatgaaccaacactgttgaagcttccctgac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caataattttagtgaccctcaacgtgccccatgaaccaacactgttgaagcttccctgac 620

                                                                       
Query: 421 ttgagatcactgctctgtaatgaagtaatgattcagcacagatgtagcaacaataaaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgagatcactgctctgtaatgaagtaatgattcagcacagatgtagcaacaataaaatg 680

                                                                       
Query: 481 ataaagtttcttcataactttttcatattgcctggatggtagcttcaccagagtaattag 540
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaagtttcttcataactttttcatattgcctggatggtagcttcaccagagtaattag 740

                                                                       
Query: 541 ttcaaaataacatagggaaagatagttagaaatgttcacacagcctagattctgaagata 600
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcaaaatagcatagggaaagatagttagaaatgttcacacagcctagattctgaagata 800

                                                                       
Query: 601 taaccatttaaagccagtgagctttaagttacttttgaaatatttaggttatattttcat 660
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 801 taaccatttaaagccagtgagctttaagttacttttgaaatatctaggttatattttcat 860

                       
Query: 661 tattttattaat 672
           ||||||||||||
Sbjct: 861 tattttattaat 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)