Query= MSMg01no295_o05.b1 MSMg01no295_o05.b1 CHROMAT_FILE:
MSMg01no295_o05.b1 PHD_FILE: MSMg01no295_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:56 2005
(318 letters)
>mm_chr4_102796079_102796796
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 4 ggaattctacatcttttaaaatctttttaaaaactagtacttttaactatttgttaatta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattctacatcttttaaaatctttttaaaaactagtacttttaactatttgttaatta 458
Query: 64 taattttaaaaagtcagtctttttggcacatatatgtttatgtaagacagaaagcattaa 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taattttaaaaagttagtctttttggcacatatatgtttatgtaagacagaaagcattaa 398
Query: 124 cactaggcagaggacatcaaagataacaacaggctgaaatataagcaggagctctgctaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cactaggcagaggacatcaaagataacaacaggctgaaatataagcaggagctctgctaa 338
Query: 184 actgctccagtatgcctccccactccacaactgtgtcatgtttgttgataaggtcactgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 actgctccagtatgcctccccactccacaactgtgtcatgtttgttgataaggtcactgt 278
Query: 244 tctaacctcagagcttcaaccatgttcagttttttgcaattctctaaaacagaaaactct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tctaacctcagagcttcaaccatgttcagttttttgcaattctctaaaacagaaaactct 218
Query: 304 aatttctgagagtc 317
||||||||||||||
Sbjct: 217 aatttctgagagtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_o05.g1 MSMg01no295_o05.g1 CHROMAT_FILE:
MSMg01no295_o05.g1 PHD_FILE: MSMg01no295_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:56 2005
(287 letters)
>mm_chr4_102637718_102638404
Length = 687
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%), Gaps = 2/286 (0%)
Strand = Plus / Plus
Query: 1 tacactacacaccaggaactgatgtcactgtcctaaggcaatgttttattattcaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tacactacacaccaggaactgatgtcactgtcctaaggcaatgttttattatttaaacct 260
Query: 61 ggctttttcttgttccgattccctcactgttggctctaactagactgcatagactgtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctttttcttgttccgattccctcactgttggctctaactagactgcatagactgtagt 320
Query: 121 tttccaggcggagaacctggttcaggtcctctgaacttaaggaatctc-aggaaatctcc 179
||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||
Sbjct: 321 tttccaggcagagaacctggttcaggtcctctgaacttaaggaatc-ctagggaatctcc 379
Query: 180 aaggaaacagatctcaaaggaataatgacaatgcccagcgttgtctgtctcattggttca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaggaaacagatctcaaaggaataatgacaatgcccagcgttgtctgtctcattggttca 439
Query: 240 tcatgaagaggaaacacgacatgcatattagcagttaacaagtatc 285
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatgaagaggaaacacgacatgcatattagcagttaacaagtatc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
