CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGAAAACAGCGGA
ATTCCTCTTGGAGTATTCTACCTTTGATGAGTATGAAGTGTCCCTCCTTG
TCCTTTTTGATAACTTTGGGTTGGAAGTCGATTTTATCCGATATTAGAAT
GGCTACTCCAGCATGTTTCTTCAGACCATTTGCTTGGAAAATTGTTTTCC
AGCCTTTCACTCTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGGGTTTCC
TGTAAGCAGCAGAATGTTGGGTCCTGTTTGTGTAGCCAGTCTGTTAGTCT
ATGTCTTTTTATTGGGGAATTGAGTCCATTAATATTAAGAGATATTAAGG
AAAAGTAATTGTTGCTTCCTTTTATTTTTGTTGTTAGAGTTGGCATTCTG
TTCTTGTGGCTGTCTTCTTTTTGGTTTGCTGAGGGATTACTTTCTTGTTT
GTTCTAGGGTGTGATTTCCGTCCTTGTATTGCTTCTTTTCTGTTATTATC
CTTTGAAGGGCTGGATTCGTGGAAAGATATTGTGTGAATTTGGTTTTGTC
GTGGAATACTTTGGTTTCTCCATCTATGGTAATTGAGAGTTTGGCCGGGT
ATAGTAGCCTGGGCTGGCATTTGTGTTCTCTTAGTGTCTGTATAACATCT
GTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGCGAAAAGTCTGGTGTACT
TCTGATAGGCCTTCCTT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAACTTGCTGAGTCCCCCTGGAGGTACT
GAGAATATAAATGAATAAAACACAAAAAGTCCTTGCTCTTCTGATCATTT
ATTTTAATGCATGGGTGCCGGGCAGAAAGATAAACAGCTAATGTATCACT
TGATGAAAAGGGTCATGAAGACAAATGAATAGGGCAAGTAGGGTAGACGC
AGATAAGGAAAGGGCGGGACTTCTCTGGATGGAGAAAGTAAGGCCAAACA
GAAATATGCTGTTTCTCATCCAATGATCTAAAGGAAGGATCATTCATGCT
TAGGGAGGCAGAAAAAGCCTACCTTCTGAGAAACAACTGCATGCTTTCTA
ACCATCAGAAGGCTTGCTAGCTGTCCTCAAGGAGAATATCAAATCTGAAC
TTTCAGCATATTTTGATGAGCACAATATCTTACAAAGATCTTTATTCTGA
AACTGTTATGCAAATATTTAGAGACAAGTTCATACACATAAGCACACTCT
AATGATATTCTAAGTATGATTTTCTCTACACAAAACCTACATCAAGCTAG
ATTCTATTCACTGTTGTAAAAGATTTAACACTTTCTTTTGTTTAAGGTAA
ACTAGAACCTATAGTCTATAGCCCTTCTAAAAAGAAACAGACCAATTTTC
AGGCTTTGTAAGGAGAATACATCAAACATGACTGAAATGTCTTT

Query= MSMg01no297_c23.g1 MSMg01no297_c23.g1 CHROMAT_FILE:
MSMg01no297_c23.g1 PHD_FILE: MSMg01no297_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:34 2005
         (671 letters)



>mm_chr4_30905577_30906647
          Length = 1071

 Score = 1268 bits (656), Expect = 0.0
 Identities = 668/672 (99%), Gaps = 1/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aact-tgctgagtccccctggaggtactgagaatataaatgaataaaacacaaaaagtcc 59
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aactgtgctgagtccccctggaggtactgagaatataaatgaataaaacacaaaaagtcc 259

                                                                       
Query: 60  ttgctcttctgatcatttattttaatgcatgggtgccgggcagaaagataaacagctaat 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgctcttctgatcatttattttaatgcatgggtgccgggcagaaagataaacagctaat 319

                                                                       
Query: 120 gtatcacttgatgaaaagggtcatgaagacaaatgaatagggcaagtagggtagacgcag 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtatcacttgatgaaaagggtcatgaagacaaatgaatagggcaagtagggtagacgcag 379

                                                                       
Query: 180 ataaggaaagggcgggacttctctggatggagaaagtaaggccaaacagaaatatgctgt 239
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 ataaggaaagggcgggacttctctggatggggaaagtaaggccaaacagaaatatgctgt 439

                                                                       
Query: 240 ttctcatccaatgatctaaaggaaggatcattcatgcttagggaggcagaaaaagcctac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttctcatccaatgatctaaaggaaggatcattcatgcttagggaggcagaaaaagcctac 499

                                                                       
Query: 300 cttctgagaaacaactgcatgctttctaaccatcagaaggcttgctagctgtcctcaagg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cttctgagaaacaactgcatgctttctaaccatcagaaggcttgctagctgtcctcaagg 559

                                                                       
Query: 360 agaatatcaaatctgaactttcagcatattttgatgagcacaatatcttacaaagatctt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agaatatcaaatctgaactttcagcatattttgatgagcacaatatcttacaaagatctt 619

                                                                       
Query: 420 tattctgaaactgttatgcaaatatttagagacaagttcatacacataagcacactctaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 620 tattctgaaactgttatgcaaatatttagagacaagttcatacacataagcacacgctaa 679

                                                                       
Query: 480 tgatattctaagtatgattttctctacacaaaacctacatcaagctagattctattcact 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgatattctaagtatgattttctctacacaaaacctacatcaagctagattctattcact 739

                                                                       
Query: 540 gttgtaaaagatttaacactttcttttgtttaaggtaaactagaacctatagtctatagc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttgtaaaagatttaacactttcttttgtttaaggtaaactagaacctatagtctatagc 799

                                                                       
Query: 600 ccttctaaaaagaaacagaccaattttcaggctttgtaaggagaatacatcaaacatgac 659
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 800 ccttctaaaaagaaacagaccaattttcagcctttgtaaggagaatacatcaaacatgac 859

                       
Query: 660 tgaaatgtcttt 671
           ||||||||||||
Sbjct: 860 tgaaatgtcttt 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)