CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCACCTCTGAGCCCCATTTTTAAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGTTAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTC
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATCTCAATCTTACAGCACAAGCCATTGCTGATCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATC
CATTTAGATTTGACCCCACCACAAGGAGATAAGTATGGATCGATTCGCAT
TCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGC
TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTTGAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTACATTGGTC
TACTTGTCTGTCTCTTTACCAGTACCATGCAGTTTTTACCACAATTGCTC
TGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTA
TCCTTGAGAAGAGTTTTTGCTATTTTAGGTTTTTTGTN

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCCTATCCAGTCTACTAACTGGA
AAACAAATATTTAAATGTATAAACATATGTGAGCCATTCACATTCAAACC
ACCACAGGGTAATGTAATTCTATTGGATAGACATAAGAGGACTCCCTAGG
CAATAACACATAGAGGATTCTCCCATACCTGATAGTGGGATTATTTTTCA
GTACCCCATTTTTCTGGAAGCAACATTAAACAGCCATTATTTGAAAATAA
AAATGAATTGCATATACAAAACAGTAGGTTTATTTTTAGCATCTGAGTTT
ACATGTCATTATATAACTGCTTTATTAACACAGGTGTGTAATATACGTCA
TATCAGATAGAATGTTTTCCTTTTTAGATTTTTTTCTCATATTTAAGACT
GCTGTAGTTATGTACCATATTTAATGATTCTAGATGAATTTTAAATCAAT
TCTCTTTACTTATGTGATAACTCTTAAATTTTAAAGTTTATCTTTATCAT
TGGTTAATTTATAGAATACTATGTTTCACTGTGACAATTCATTTATATAG
AGGATACATTTTGATCATGCTATCTTTCCATTGTTGATCATGCAATACTT
TCCTGTATGAGTTTGGTTTATTTACACAGGGAATGTTGTATTTCATAGAC
TGAAGTGGGTGACATAGATATATTCTTAAGATTTTTCCTATAAG

Query= MSMg01no297_e22.g1 MSMg01no297_e22.g1 CHROMAT_FILE:
MSMg01no297_e22.g1 PHD_FILE: MSMg01no297_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:43 2005
         (628 letters)



>mm_chr4_26990036_26991061
          Length = 1026

 Score = 1181 bits (611), Expect = 0.0
 Identities = 624/629 (99%), Gaps = 4/629 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcctatccagtctactaactggaaaacaaatatttaaatgtataaacatatgtgagcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctatccagtctactaactggaaaacaaatatttaaatgtataaacatatgtgagcca 260

                                                                       
Query: 61  ttcacattcaaaccaccacagggtaatgtaattctattggatagacataagaggactccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcacattcaaaccaccacagggtaatgtaattctattggatagacataagaggactccc 320

                                                                       
Query: 121 taggcaataacacatagaggattctcccatacctgatagtgggattatttttcagtaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggcaataacacatagaggattctcccatacctgatagtgggattatttttcagtaccc 380

                                                                       
Query: 181 catttttctggaagcaacattaaacagccattatttgaaaataaaaatgaattgcatata 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 -atttttctggaagcaacattaaacagccattatttgaaaataaaaatgaattgcatata 439

                                                                       
Query: 241 caaaacagtaggtttatttttagcatctgagtttacatgtcattatataactgctttatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaaacagtaggtttatttttagcatctgagtttacatgtcattatataactgctttatt 499

                                                                       
Query: 301 aacacaggtgtgtaatatacgtcatatcagatagaatgttttcctttttagatttttttc 360
           ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 500 aacacaggtgtgtaatatacgtcatatcagatagaatttttt--tttttagatttttttc 557

                                                                       
Query: 361 tcatatttaagactgctgtagttatgtaccatatttaatgattctagatgaattttaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcatatttaagactgctgtagttatgtaccatatttaatgattctagatgaattttaaat 617

                                                                       
Query: 421 caattctctttacttatgtgataactc-ttaaattttaaagtttatctttatcattggtt 479
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 618 caattctctttacttatgtgataactcattaaattttaaagtttatctttatcattggtt 677

                                                                       
Query: 480 aatttatagaatactatgtttcactgtgacaattcatttatatagaggatacattttgat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aatttatagaatactatgtttcactgtgacaattcatttatatagaggatacattttgat 737

                                                                       
Query: 540 catgctatctttccattgttgatcatgcaatactttcctgtatgagtttggtttatttac 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 catgctatctttccattgttgatcatgcaatactttcctgtatgagtttggtttatttac 797

                                        
Query: 600 acagggaatgttgtatttcatagactgaa 628
           |||||||||||||||||||||||||||||
Sbjct: 798 acagggaatgttgtatttcatagactgaa 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1026
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1016
Effective search space:   627888
Effective search space used:   627888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)