ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGGAGGAATTTTAATGAGTTGTTTCTATTTCCAGGGGTATGTG
TGTCTCTGGGATTGTCTAGCTGCCCCGGGATGTTCCAGGAGAAACCTAAA
AACTGCTGCTAACATGTCCTGACAGACTGCTTTTCCCTCAACCAGATGAT
GAGGCAGCTCCTGATTGATTATCCATGGGGGCTGTGTTTATTTCCACTAA
CTGACTTGTCCAGGCTTCTCTGGTTCTGGCAAAGAGAAACTTAGGCCTAG
TTTCCCAAGCTGTCAGTTTGGAGCCTGTCCTGGAGTCTTCCTGGCTTAGT
CCTATCAAGTCTAGATTTTATTAGTCCTGCCGCCCACATCCATGAAGGGT
ATTACAGAACACACATGATTCCCTTTGTAAAGAGCATTATTTATTATTGA
CTATTATTGATCATGATATTTATATCAGAGGATGTTGACCTATTGAGACT
CATATATTCTAATACTTCCTGGGAAGCAGGTGATGCCTTTTAAATCACAT
CGACCTACCTAGAATCTATTATTAGTGTGGAGTATAGAAATAAAACTGGC
GTTTCAGTTTTCTGAGCTGCTGCTGCCTAGACATATTANACAATGGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGTGTGCGTGTGCATGTA
TGTGTTTGTGTGTGTGTGTGTGTG

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGTGGATATCAGGACACAGCA
AGACACTTGGCACAATTGGATGCAAAGTGCATAATAAGAAAGAGGGGAAA
GGCTAAATCTTGTTGCCTGGCAGAGGAGGGCCTTGTCTCCCAAGAAACTT
CATCAAACCATCTTGCAAGAGAAACTGGAGTCCAGGCAGTAATGGGTTAG
TAATGGTTGGGACCACATCATGGCTGAGACTGCTTAGCTATGCATGCCTC
TTGCCCTCTATTTAAAACTAATCCTCAGATGGGCTTGGGGTGGGAAGCAA
CAGTGACAGGACGTCTTTTTTCNCCTTCCTNCCATGCCCCTACAATAAAT
AAATCTCCCTCCTCCNNAANAAAAAAAAAGAAAAAAAAAAAAAAAGANGG
GGGAGGGAGGGGAGAAAAAAGAAAGAAAGAGGTTTCTCACTCAGGATCTA
TTGACTTACACTTAGTTATGAGTGCAGGACCAGTAGCGAAAATCAGTCCC
AGTTAAAGCCCAACTGGAACATGTCTGTGTACAGTCAAAACTATTCAGAT
ACTGCTCTAAAATGGGCTCATAATAAGGTATTTAGTGACTAAATCATATT
TAAAATGTTAAAAAAACAAATAATGCTCTCCCTTGGGAATTAGAAATTAG
TGAGTTTTAGAAGCTGATAAAGGGAATAGAAN

Query= MSMg01no302_i24.b1 MSMg01no302_i24.b1 CHROMAT_FILE:
MSMg01no302_i24.b1 PHD_FILE: MSMg01no302_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:13 2005
         (239 letters)



>mm_chr4_36821710_36822348
          Length = 639

 Score =  435 bits (225), Expect = e-126
 Identities = 234/237 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttccaggagaaacctaaaaactgctgctaacatgtcctgacagactgcttttccctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgttccaggagaaacctaaaaactgctgctaacatgtcctgacagactgcttttccctc 264

                                                                       
Query: 61  aaccagatgatgaggcagctcctgattgattatccatgggggctgtgtttatttccacta 120
           |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 263 aaccagatgatgaggcagctcctgattggttatccttgggggctgtgtttatttccacta 204

                                                                       
Query: 121 actgacttgtccaggcttctctggttctggcaaagagaaacttaggcctagtttcccaag 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 203 actgacttgtccaggcttctctggttctggcaaagggaaacttaggcctagtttcccaag 144

                                                                    
Query: 181 ctgtcagtttggagcctgtcctggagtcttcctggcttagtcctatcaagtctagat 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ctgtcagtttggagcctgtcctggagtcttcctggcttagtcctatcaagtctagat 87


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no302_i24.g1 MSMg01no302_i24.g1 CHROMAT_FILE:
MSMg01no302_i24.g1 PHD_FILE: MSMg01no302_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:13 2005
         (292 letters)



>mm_chr4_36642791_36643482
          Length = 692

 Score =  543 bits (281), Expect = e-159
 Identities = 287/289 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttggtggatatcaggacacagcaagacacttggcacaattggatgcaaagtgcataata 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggtagatatcaggacacagcaagacacttggcacaattggatgcaaagtgcataata 260

                                                                       
Query: 61  agaaagaggggaaaggctaaatcttgttgcctggcagaggagggccttgtctcccaagaa 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagaggggaaaggctaaaacttgttgcctggcagaggagggccttgtctcccaagaa 320

                                                                       
Query: 121 acttcatcaaaccatcttgcaagagaaactggagtccaggcagtaatgggttagtaatgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcatcaaaccatcttgcaagagaaactggagtccaggcagtaatgggttagtaatgg 380

                                                                       
Query: 181 ttgggaccacatcatggctgagactgcttagctatgcatgcctcttgccctctatttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgggaccacatcatggctgagactgcttagctatgcatgcctcttgccctctatttaaa 440

                                                            
Query: 241 actaatcctcagatgggcttggggtgggaagcaacagtgacaggacgtc 289
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaatcctcagatgggcttggggtgggaagcaacagtgacaggacgtc 489


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)