TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAAAGAGTTCCCTGTCTGTTTCCCCAGCTCAAGCATGGCGGATGT
ATGCTACCATACTTAGTCTTATGTGAGTACTAGACATCCAAATTCAAGTC
CTCACATGTCTCTAGCAAGTTCTTTTCATTCCCAGCCATATCCCTATTCC
CCATTTCCTTACAGTTTTGATGTAAGTTTGTAATACTTGTTTCTGATTTT
TAAAGTATTGACTTTCACCTTAATAATTTTGTGACCTGTTGAGCATCAGG
TTGGTATCCATTTCAAAAATTAAAACAGCAATTTATTGGTTGTTATAAGG
CATGAAACACTGCTTCTCAGTTGCAGAGTCCCAAATGCACTCTTCATCTC
TCTTGTTTGTGCTTTATTTCTTTCCCTCCTTCATGTTTGCTTTGGCTTGC
AAACTTGCTCCTGCCAAACGAGACAGTTGAAATGGGAACATTAATTTTTA
TGCATGGAAGCATGTCAACTACTCAGGGAGAGAGGGGGGATGGTGTATAC
TGAGCAGGCTGAGCTGTCACAAGAAAAGACTCAGACATTGTAACACAATG
TAAGCTCTTTACCAGGGACCCTATGGGTGAAAGCCTGGGGTTCAGTTTTT
TGAAAATCTTATTTTGGACTCAAAAAAAAAAAACTTCTGTATAATATTTG
ACCATTTACATTCTTATCCTAATGCATCATCTTT

TTTCTTTCTCCGCCCTTTTTCCCCCCCTTTCGATGCAAXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXATATTGAAATACATATACATAAACACATACAATACGGAAATTATT
ATAGGCACTATGAGAGGGCGAATAGTGAGTGAATTATGTGATAAAACACT
TAGGGAAACATTCCATAATACAAAGCCACTAATTTTGTGATATGAATTAT
TGTACCACCACCTTGGTAAACAAGTTCTCCTTTACCCCCCGGGTTTTCCC
TTTTTTATTTTTTAACGCCACCAACGGAACCAACATTTTCGTTCCTCGGG
ACCAACAGAAATGTTCCTTATAATCCTGCCTAATTCCCTTCCTTTTTTTC
ACGTGTGTTTCTTTTCTCCTATAAAAGACGGGGGCGTTTTTTTTTTATCA
TTTACCCCCCTTTTTCTTCCCTCTTCTCACTAAACCTCGAACCCCCTTCT
TGCGCGCCATTATTTTGTTCCTTTCCTTCTCCCCCCCTTTTTTTTTTCTT
TCATTTTCCGGCACCCCTCTTTTATCACACTCGCGTATTTCATGGTTTCC
CCCTTCACAAATTTCACCGTTGTTTACCTTTCCTGTCCCTGTTTTATCTG
TCCTCCCTTTTTACCTATGGTTCCGCGTTGTTCTTATCCCCCCCGGTCCC
TCTTTTTTTTCACCTTTGTCCCCTGTTTCTACACGATCCTTCACCCTTTT
CCCTTACCCTTCA

Query= MSMg01no302_j02.b1 MSMg01no302_j02.b1 CHROMAT_FILE:
MSMg01no302_j02.b1 PHD_FILE: MSMg01no302_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:14 2005
         (538 letters)



>mm_chr4_13081192_13082129
          Length = 938

 Score = 1002 bits (518), Expect = 0.0
 Identities = 530/534 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaaagagttccctgtctgtttccccagctcaagcatggcggatgtatgctacca 64
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaagagctacctgtctgtttccccagctcaagcatggcggatgtatgctacca 264

                                                                       
Query: 65  tacttagtcttatgtgagtactagacatccaaattcaagtcctcacatgtctctagcaag 124
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 tacttagtcttatgtgagtactagacatccaaattcaggtcctcacatgtctctagcaag 324

                                                                       
Query: 125 ttcttttcattcccagccatatccctattccccatttccttacagttttgatgtaagttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttttcattcccagccatatccctattccccatttccttacagttttgatgtaagttt 384

                                                                       
Query: 185 gtaatacttgtttctgatttttaaagtattgactttcaccttaataattttgtgacctgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaatacttgtttctgatttttaaagtattgactttcaccttaataattttgtgacctgt 444

                                                                       
Query: 245 tgagcatcaggttggtatccatttcaaaaattaaaacagcaatttattggttgttataag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgagcatcaggttggtatccatttcaaaaattaaaacagcaatttattggttgttataag 504

                                                                       
Query: 305 gcatgaaacactgcttctcagttgcagagtcccaaatgcactcttcatctctcttgtttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcatgaaacactgcttctcagttgcagagtcccaaatgcactcttcatctctcttgtttg 564

                                                                       
Query: 365 tgctttatttctttccctccttcatgtttgctttggcttgcaaacttgctcctgccaaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgctttatttctttccctccttcatgtttgctttggcttgcaaacttgctcctgccaaac 624

                                                                       
Query: 425 gagacagttgaaatgggaacattaatttttatgcatggaagcatgtcaactactcaggga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagacagttgaaatgggaacattaatttttatgcatggaagcatgtcaactactcaggga 684

                                                                 
Query: 485 gagaggggggatggtgtatactgagcaggctgagctgtcacaagaaaagactca 538
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagaggggggatggtatatactgagcaggctgagctgtcacaagaaaagactca 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)