Query= MSMg01no302_n09.b1 MSMg01no302_n09.b1 CHROMAT_FILE:
MSMg01no302_n09.b1 PHD_FILE: MSMg01no302_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:34 2005
(313 letters)
>mm_chr4_140090454_140091166
Length = 713
Score = 600 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Minus
Query: 4 ggaattcatcaactgggcgagactggctggtgctggctgtgttcctcagggatcttcctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggaattcatcaactgggcgagactggctggtgctggctgtgttcctcagggatcttcctg 600
Query: 64 tctccataccaccgtgacccccgtactgggatataagcatgtgcctccccttttaaagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tctccataccaccgtgacccccgtactgggatataagcatgtgcctccccttttaaagta 540
Query: 124 cgagttctggggcttgaattcatgtctatgtaccacactgtctcctaagccccatgctgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cgagttctggggcttgaattcatgtctatgtaccacactgtctcctaagccccatgctgt 480
Query: 184 cctttgtaaagaggctgctgggggctcctggctgtcttgaatggtctgtcccattcaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cctttgtaaagaggctgctgggggctcctggctgtcttgaatggtctgtcccattcaaga 420
Query: 244 gctaattggacatgacaccgaggacctgtgacctccctggtgctgctgggcagtgccaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctaattggacatgacaccgaggacctgtgacctccctggtgctgctgggcagtgccaca 360
Query: 304 gtgaccaggt 313
||||||||||
Sbjct: 359 gtgaccaggt 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_n09.g1 MSMg01no302_n09.g1 CHROMAT_FILE:
MSMg01no302_n09.g1 PHD_FILE: MSMg01no302_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:34 2005
(235 letters)
>mm_chr4_139908268_139908903
Length = 636
Score = 449 bits (232), Expect = e-131
Identities = 235/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 1 cttaaacatctggac-gaagtgacacacacatacaaagaccatcggaggaaaaaaggtct 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaacatctggacagaagtgacacacacatacaaagaccatcggaggaaaaaaggtct 260
Query: 60 ccctgtaatgtatctttatctaattgtagtctcttctggacacacatgaactgggcttgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctgtaatgtatctttatctaattgtagtctcttctggacacacatgaactgggcttgc 320
Query: 120 agggagccaagcatggttcagcctcaggatggaatcccagtacaaactggctatggtcag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggagccaagcatggttcagcctcaggatggaatcccagtacaaactggctatggtcag 380
Query: 180 agtggattcagtgggtacagtcaattcctaaacctgggacaggctggactctaggt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggattcagtgggtacagtcaattcctaaacctgggacaggctggactctaggt 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 636
Length adjustment: 9
Effective length of query: 226
Effective length of database: 627
Effective search space: 141702
Effective search space used: 141702
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
