GCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTAGGCTAACTGATGGATCTGGAGGATATTATCCTGAGTGAGGT
AACCCAATCACAAAGGAACTCACATGATATGCACTCACTGATAAGTGAAT
ATTAGCCCAGAAACTTAGAATACCCAAGATATAATTTGCAAAATACATGA
AACTCAAGAAGGAAGACCAAAGTGTGGATACTTTGTTCCTCCTTAGAATA
GGGAACAAAACACCTATGGAAGGAGTTATAGAGACAAAGTTTGGAGCTGA
GATGGAAGGAAGGACCATCCAGAGACTATTCCACCTGGGGATCCATCCCA
TTATCAGCCACTGAACGCAGATACTATTGCACATGCTATCAAGATTTTGC
TGACAGGACCCTGATATAATTGTCTCTTGTGAGGCTATGCAAGTGGCTGG
CAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATGGAACACAGGGC
TCCCAGTGCAGAAGCTAGAGAAAGTATCCAAGGACCTAAAGGGGTCTGCA
GCCCTATAGGAGGAACAACAATATGAACTAATCAGTACCTCCAAAGCTCA
TGTCTCTACCTGCATATGTAGCAGAATATGGCCTAGTCGGCCATCATTGT
GAAGAGAGGCCCTTGAACTTGAGATCAGATACCACAGTACAGGAGAATGC
AAGGGTCAGGAAGTATGATTGGGTGG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAACTTGACCCCTCATCCTTATGAA
GCAAGTGTAGCCACCAGTGGCTACATGAACTGGGTTCCCGAGAGGAAGGC
TGGGGCTGTATGAGAGAAAGAATGAAAGAAGAAAGAGACCAAGACAAGTT
ACTGATCAAGGGCCAAAGTTTATCTTTTGAGTCTGAACTTAAAAGGGGGG
AAGCCCATTCCCCCACCACTTCAGGAGAACAGGTTCAGCCTCTAACCAGG
TTGTGGCATCTCGGAGGAAACCGCAGATGTAGCAGAACAATAGACTTTAC
CTAGGTTGGAAGACTCCACCCTAGGTGGGCTAGGGGGCTGTGGCAAGCCA
GGTCTGAGCCAGCCTGCTCAAAGCTGGGGGAGAGTACAAACAAGTACTTT
ACAGACTAAGCTATTGTCCAGCCTGTATCTCCTCTTCAAACAATATCCTT
TCCACTGCCTGTACATCAGAAAGATAGGGTCAACATTTTTACCCAGAGCA
GCTGTTGGGTCCAGACGGTGGAGATGCACATGACACAAAGGGTGATATAC
ATTTTACAGTTGACAATGCAGTTTTCTTAGTAGTCAGAGTATTTGATTTC
CACATTCAATGAATATAAAGGATTGGGCCATTCTAGTTATATGTAATTTT
TGGTGAGTTAGTTATTGCAGTGAATTATTAN

Query= MSMg01no303_n10.g1 MSMg01no303_n10.g1 CHROMAT_FILE:
MSMg01no303_n10.g1 PHD_FILE: MSMg01no303_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:51 2005
         (642 letters)



>mm_chr4_49241352_49242393
          Length = 1042

 Score = 1218 bits (630), Expect = 0.0
 Identities = 639/642 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacttgacccctcatccttatgaagcaagtgtagccaccagtggctacatgaactgggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttgacccctcatccttatgaagcaagtgtagccaccagtggctacatgaactgggtt 260

                                                                       
Query: 61  cccgagaggaaggctggggctgtatgagagaaagaatgaaagaagaaagagaccaagaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccgagaggaaggctggggctgtatgagagaaagaatgaaagaagaaagagaccaagaca 320

                                                                       
Query: 121 agttactgatcaagggccaaagtttatcttttgagtctgaacttaaaaggggggaagccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttactgatcaagggccaaagtttatcttttgagtctgaacttaaaaggggggaagccc 380

                                                                       
Query: 181 attcccccaccacttcaggagaacaggttcagcctctaaccaggttgtggcatctcggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcccccaccacttcaggagaacaggttcagcctctaaccaggttgtggcatctcggag 440

                                                                       
Query: 241 gaaaccgcagatgtagcagaacaatagactttacctaggttggaagactccaccctaggt 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaccgcagatgtggcagaacaatagactttacctaggttggaagactccaccctaggt 500

                                                                       
Query: 301 gggctagggggctgtggcaagccaggtctgagccagcctgctcaaagctgggggagagta 360
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 501 gggctagggggctgtggcaagccaggtctgagccagcctgctcaaggctgggggagagca 560

                                                                       
Query: 361 caaacaagtactttacagactaagctattgtccagcctgtatctcctcttcaaacaatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaacaagtactttacagactaagctattgtccagcctgtatctcctcttcaaacaatat 620

                                                                       
Query: 421 cctttccactgcctgtacatcagaaagatagggtcaacatttttacccagagcagctgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctttccactgcctgtacatcagaaagatagggtcaacatttttacccagagcagctgtt 680

                                                                       
Query: 481 gggtccagacggtggagatgcacatgacacaaagggtgatatacattttacagttgacaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggtccagacggtggagatgcacatgacacaaagggtgatatacattttacagttgacaa 740

                                                                       
Query: 541 tgcagttttcttagtagtcagagtatttgatttccacattcaatgaatataaaggattgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcagttttcttagtagtcagagtatttgatttccacattcaatgaatataaaggattgg 800

                                                     
Query: 601 gccattctagttatatgtaatttttggtgagttagttattgc 642
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gccattctagttatatgtaatttttggtgagttagttattgc 842


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)