Query= MSMg01no304_e09.b1 MSMg01no304_e09.b1 CHROMAT_FILE:
MSMg01no304_e09.b1 PHD_FILE: MSMg01no304_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:41 2005
(631 letters)
>mm_chr4_67732545_67733575
Length = 1031
Score = 1100 bits (569), Expect = 0.0
Identities = 616/633 (97%), Gaps = 4/633 (0%)
Strand = Plus / Minus
Query: 1 ggatactggcatatttctgccttaatgaaccctt--actgaacctctgaacctgtaaacc 58
||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 886 ggatactggcatatttctgccttaatgaa--catggactgaacctctgaacctgtaaacc 829
Query: 59 atcccaattaaatgttgtccttgcaagagttgccttggtcatggtgtctcttcatagtaa 118
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 828 atcccaattaaatgttgtccttgcaagagttaccttggtcatggtgtttcttcatagtaa 769
Query: 119 acccctaactaagacaatagttattaaggcacgaactgatgcatttctagataggtacat 178
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 768 acccctaactaagacaatagttattaaggcacgaactgatgaatttctagataggtacat 709
Query: 179 tacttaaatacgttaaaatgtttccagttatttctgctgttacacttcagttctattata 238
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 708 tacttaaatatgttaaaatgtttccagttatttctgctgtgacacttcagttctattata 649
Query: 239 acaaataaaataatctcttcattctttatcaatgcattctaagcaagatagatattattt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 acaaataaaataatctcttcattctttatcaatgcattctaagcaagatagatattattt 589
Query: 299 aatgaattgagaagtgaagagtggacatggaggtgagtcagaaggagattctaggcagag 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 588 aatgaattgagaagtgaagagtggacatggaggtgaatcagaaggagattctaggcagag 529
Query: 359 atcactcatcatcttgcaatataggagaaatgtgatttggcaacttccgactaattttaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atcactcatcatcttgcaatataggagaaatgtgatttggcaacttccgactaattttaa 469
Query: 419 aagatgagaaatggaaaagataggagaaaataaagaagtcagaatcctccaagaaaatgt 478
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 468 aagatgagaaatggaaaagagaggagaaaataaagaagtcagaatcccccaagaaaatgt 409
Query: 479 cagactatataccttgaaaggtgaagcagatatgaaaattccttaatcaaggaacaaaag 538
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 408 cagactatataccttgaaaggtaaagcagacatgaaaattccttaatcaaggaacaaaag 349
Query: 539 gaatttcttcattttcatgtattatgtatgtatacatgtatgtatttatgaatgatggat 598
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 348 gaatttcttcatttacatgtattatatatgtatacatgtatgtatttatgaatgatggat 289
Query: 599 atgtgtgtttgcatgtatgaaagtctatttgag 631
|||||||||||||||||||||||||||||||||
Sbjct: 288 atgtgtgtttgcatgtatgaaagtctatttgag 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no304_e09.g1 MSMg01no304_e09.g1 CHROMAT_FILE:
MSMg01no304_e09.g1 PHD_FILE: MSMg01no304_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:41 2005
(196 letters)
>mm_chr4_67641836_67642431
Length = 596
Score = 327 bits (169), Expect = 3e-94
Identities = 189/197 (95%), Gaps = 4/197 (2%)
Strand = Plus / Plus
Query: 1 ccattttcaattggatttctttttgatgaataccgttttgttgttgtggtttgttatatg 60
|||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 201 ccattttcaattggatttctttttgatgaataagggtttgtttttgtggtttgttatatg 260
Query: 61 tggcagatactatttggctgtcaacattgtggctaccaaatattctcttattttgtgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcagatactatttggctgtcaacattgtggctaccaaatattctcttattttgtgggc 320
Query: 121 tacctcttcactcagttcagttttttgtttgtttg-tt---tggttttgttgttgttgtt 176
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 321 tacctcttcactcagttcagttttttgtttgtttggttggttggttttgttgttgttgtt 380
Query: 177 gttgtttggggtgtgtg 193
|||||||||||||||||
Sbjct: 381 gttgtttggggtgtgtg 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
