ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTATTTCACCTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATC
AATTTGCATTCTTCTACATGATAACCACCAGTTCTGCCAGCACCATTTGT
TGAAAATGCTGTCTTCTTTTCCACTGGATAGTTTTAGCTCCTTTGTCAAA
GATCAAGTGACCATAGGTGTGTGGGTTCATTCTGGGTCTTCAATTCTATT
CCATTTGTCTACTTGTCTGTGGCTATACCAGTATCATGCAGTTTTGATGA
CAATTGCTCTGTCGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAG
GTTCTTTTATCCTTGAGAAGAGTTTTTGCTCTCCTAGGTTTTTTGTTATT
CCAGATGAATTCCCACATTGCTATTTCTAATTCATTGAAGAATTGAGTTG
GAATTATGATGGGGATTGCATTGAATCTGTAGATTGCTTTTGGCAAGATA
GCCATTTTTACAATGTTGATCCTGCCAATCCATGTGCATGGGAGGTCTTT
CCATATTCTGAGATCTTCTTTAATTTCTTTCTTCAGAGACTTGAAGTTCT
TATCATACATATCTTTCACTTCCTTAGTTAGAGTCACACCAAGGTATTTT
ATATTATTTGTGACAATTGAGAAGGGTGTTGTTTCCCTAATTTCTTTCTC
AGCATGTTTATTCTTTGTGTACAGAAAATCCATTGACT

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTATATAATATATTTGATCATATATGAT
GCTTTCTCCTCTTTTTCCCAACATCAACCCTTCTTCCTATTTACTTACAC
ATACACCTTTTCATTTTCTTACATCTTAAGCCCAGCAAGTAAAGTCTGTG
TTTTTCATGTGCCCTTAGATATGTAGCTTTTTGGTGAAAATTATAGTTTC
ACCAGACTTCATAGTTTTTAGAAGATTGGATCCTTTTTTCTCAGAAGCTA
TCAATTGTCAATACCTTCTTTATTAGAGGTAGGAATGTATTTCAGCATCC
CTTCTTCATGCTACTTTTTATGGCTTTGGTTTGCATAGGTCTTGTGAATG
TTATCAAACTGCACCACCTCATTTGCACAACTGCCTTGTTGTGTCCTGCA
AACATCGTCTCATTTTAATGTCAGATACTTCCTGCTTTTACAACTTTTTT
CTTCATTATTTTTCTTCTGCAATGATTTCTGAGCCTTTGGAGGAGGATAT
GTGATTTATTTGTTTTGTTTAAGAATGAATACACCAGCCTTTCACTCTAT
AGATCACAATTAGTTGCCATACACTATGTTAGTTGCAATCACCTATAAAA
GAGTCTTTTCTGATAAAGATTTAGAGAAGAATTAATCTATATGTAAAACA
ATAACTCATTTAGAATTACAATCTTATTATCCTCATTTG

Query= MSMg01no307_i16.g1 MSMg01no307_i16.g1 CHROMAT_FILE:
MSMg01no307_i16.g1 PHD_FILE: MSMg01no307_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:38 2005
         (596 letters)



>mm_chr4_26919238_26920233
          Length = 996

 Score = 1038 bits (537), Expect = 0.0
 Identities = 582/597 (97%), Gaps = 2/597 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatataatatatttgatcatatatgatgctttctcctctttttcccaacatcaacccttc 60
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 201 tatataatatatttgatcatatataatgctttctcctctttttcccaagatcaacccttc 260

                                                                       
Query: 61  ttcctatttacttacacatacaccttttcattttcttacatcttaagcccagcaagtaaa 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctacttacttacacatacaccttttcattttcttacatcttaagcccagcaagtaaa 320

                                                                       
Query: 121 gtctgtgtttttcatgtgcccttagatatgtagctttttggtgaaaattatagtttcacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgtgtttttcatgtgcccttagatatgtagctttttggtgaaaattatagtttcacc 380

                                                                       
Query: 181 agacttcatagtttttagaagattggatccttttttctcagaagctatcaattgtcaata 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacttcatagtttttagaagattggatccttttttctcagaagctatcaattgtcaata 440

                                                                       
Query: 241 ccttctttattagaggtaggaatgtatttcagcatcccttcttcatgctactttttatgg 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttctttaatagaggtaggaatgtatttcagcatcccttcttcatgctactttttatgg 500

                                                                       
Query: 301 ctttggtttgcataggtcttgtgaatgttatcaaactgcaccacctcatttgcacaactg 360
           ||||||||||||||||||||||||||||||||||||||||  | ||||||| |||| |||
Sbjct: 501 ctttggtttgcataggtcttgtgaatgttatcaaactgcatgagctcatttacacagctg 560

                                                                       
Query: 361 ccttgttgtgtcctgcaaacatcgtctcattttaatgtcagatacttcctgcttttacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 561 ccttgttgtgtcctgcaaacatcgtctcattttaatgtcagatacatcctgcttttacga 620

                                                                       
Query: 421 cttttt-tcttcattatttttcttctgcaatgatttctgagcctttggaggaggatatgt 479
            ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 -tttttgtcttcattatttttcttctgcaatgatttctgagcttttggaggaggatatgt 679

                                                                       
Query: 480 gatttatttgttttgtttaagaatgaatacaccagcctttcactctatagatcacaatta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatttatttgttttgtttaagaatgaatacaccagcctttcactctatagatcacaatta 739

                                                                    
Query: 540 gttgccatacactatgttagttgcaatcacctataaaagagtcttttctgataaaga 596
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttgccatacactatgttagttgcaatcacctataaaagagtcttttctgataaaga 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)