Query= MSMg01no312_a06.b1 MSMg01no312_a06.b1 CHROMAT_FILE:
MSMg01no312_a06.b1 PHD_FILE: MSMg01no312_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:00 2005
(662 letters)
>mm_chr4_154350546_154351606
Length = 1061
Score = 1226 bits (634), Expect = 0.0
Identities = 652/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Plus
Query: 5 gaattcaacttcccaccatccctactccaaggtgagccatgtagactacaagtagggtgc 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacttcccag-atccctactccaaggtgagccatgtagactacaagtagggtgc 263
Query: 65 agaggactcagtagcattttgttgtgccagcctcaggaggtctaagctcacactggctag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agaggactcagtagcattttgttgtgccagcctcaggaggtctaagctcacactggctag 323
Query: 125 ttctaggtgcacagctctactctaggcgtgtgttagcactcctccatccctctggctagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctaggtgcacagctctactctaggcgtgtgttagcactcctccatccctctggctagg 383
Query: 185 agccgtgggccccttgtttccctgttgtcagccaccttgcccttcctcagctgcccatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agccgtgggccccttgtttccctgttgtcagccaccttgcccttcctcagctgcccatgc 443
Query: 245 acagtggcctctgggggtgcatacccggtgccctcctaactccactaagtcttgtgggcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acagtggcctctgggggtgcatacccggtgccctcctaactccactaagtcttgtgggcc 503
Query: 305 agagtgcctccctgcttcacccaacaccaggtagacctgaggactgccccaaatcagtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agagtgcctccctgcttcacccaacaccaggtagacctgaggactgccccaaatcagtaa 563
Query: 365 gtagcctgccacccagccctgagcgttacctctcgggagcacgacaccaaatgccccctt 424
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 gtagcctggtacccagccctgagcgtcacctctcgggagcacgacaccaaatgccccctt 623
Query: 425 ctccctggttagtgttttcagtcctcgttgaggccccttcatctgctgccctgcagagac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctccctggttagtgttttcagtcctcgttgaggccccttcatctgctgccctgcagagac 683
Query: 485 ctccctagagggtacaaggagtggtgtgggcctaccttcagagtgagcaccaataaagca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctccctagagggtacaaggagtggtgtgggcctaccttcagagtgagcaccaataaagca 743
Query: 545 acgcctgtgtgtctttcccacaggtgaagcagaaagaaaatggcctcgcactaaaatgct 604
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 744 acgcctgtgtgtctttcccacaggtgaagcagaaagaaaacggcctcgcactaaaatgct 803
Query: 605 ttcagagcgtgacgcgctcgctggactcactaggctgggaagagcggcagctggccct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttcagagcgtgacgcgctcgctggactcactaggctgggaagagcggcagctggccct 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1061
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1051
Effective search space: 685252
Effective search space used: 685252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_a06.g1 MSMg01no312_a06.g1 CHROMAT_FILE:
MSMg01no312_a06.g1 PHD_FILE: MSMg01no312_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:00 2005
(317 letters)
>mm_chr4_154442478_154443188
Length = 711
Score = 555 bits (287), Expect = e-162
Identities = 307/317 (96%), Gaps = 6/317 (1%)
Strand = Plus / Minus
Query: 1 ctgcgtcctccaggtagcagactgccctgcgaagcccggggagcatcgccatcggcttgc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 511 ctgcgtcctccaggtagcagactgccctgtgaagcccggggagcatcgccatcggcttgc 452
Query: 61 agctcctgctccaggggcagcagtgccttgtctagcaggtagggcaagacagcatgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agctcctgctccaggggcagcagtgccttgtctagcaggtagggcaagacagcatgcagt 392
Query: 121 gcaaccagcgctccacggcggagcctggagggcacacgctgctgggatgggtccacttgg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcaaccagcgctgcacggcggagcctggagggcacacgctgctgggatgggtccacttgg 332
Query: 181 atgatcccaacgtactcctccccaagggtctggtagcctgaggattaatacacagtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgatcccaacgtactcctccccaagggtctggtagcctgaggattaatacacagtgatg 272
Query: 241 agggtccagggacaagcttccgggccagcctgtgtcgtcgtggcccccccccccccagcc 300
|||||||||||||||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 271 agggtccagggacaagtttccgggccagcctgtgtcgtcgt------cccccctccagcc 218
Query: 301 tcaccagtcaccctgag 317
|||||||||||||||||
Sbjct: 217 tcaccagtcaccctgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 711
Length adjustment: 9
Effective length of query: 308
Effective length of database: 702
Effective search space: 216216
Effective search space used: 216216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
